iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d033248	Zm00001d033248_T004	Zm00001d033248_T004
Zm00001d033248	Zm00001d033248_T002	Zm00001d033248_T002
Zm00001d033248	Zm00001d033248_T005	Zm00001d033248_T005
Zm00001d033248	Zm00001d033248_T006	Zm00001d033248_T006

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-28	99.2	278	311

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+++v+claf   +++ +++Gs D+t+k++Dlr+
   Q: 278  HQGEVNCLAFnpfNEWVVATGSTDKTVKLFDLRK 311
           9**********977799**************986 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPKAGGGAAD EEEFRAEVEE RLINEEYKIW KKNTPFLYDL VITHALEWPS LTVQWLPDRT 60
EPPGKDHSVQ KMILGTHTSD NEPNYLMLAQ VQLPLDDAEA DARHYDDDHA DIGGFGAASG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTCGCCCA ATTTCTCTCC CACCCTCCTG CTCCTCCTCC CGCGGTCCCG CCATTTCGTC 60
CCCCGCTCAC CAACTCAAAC CCCCTCCGCT CTCAAACCCT AACCCTAGCC CTAGCCCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

zma:542545

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000757	Aegilops tauschii	85.09	0.00e+00	711.00
IUUC-Aml-001339	Ailuropoda melanoleuca	66.75	2.00e-158	551.00
IUUC-Atr-003075	Amborella trichopoda	86.13	0.00e+00	761.00
IUUC-Apl-003952	Anas platyrhynchos	67.50	1.00e-162	565.00
IUUC-Aca-004508	Anolis carolinensis	67.50	2.00e-162	565.00
IUUC-Aly-006342	Arabidopsis lyrata	86.41	0.00e+00	755.00
IUUC-Ath-006855	Arabidopsis thaliana	86.62	0.00e+00	756.00
IUUC-Acl-008163	Aspergillus clavatus	48.28	1.00e-112	399.00
IUUC-Afu-009091	Aspergillus fumigatus	48.04	4.00e-111	394.00
IUUC-Ang-009707	Aspergillus niger	48.04	1.00e-110	392.00
IUUC-Bgr-012001	Blumeria graminis	44.64	1.00e-94	339.00
IUUC-Bci-013815	Botrytis cinerea	46.00	8.00e-111	393.00
IUUC-Bdi-014926	Brachypodium distachyon	95.82	0.00e+00	833.00
IUUC-Bol-015856	Brassica oleracea	83.37	0.00e+00	736.00
IUUC-Bra-016725	Brassica rapa	77.18	0.00e+00	700.00
IUUC-Cre-022563	Chlamydomonas reinhardtii	69.15	2.00e-169	587.00
IUUC-Dre-028742	Danio rerio	66.50	5.00e-160	556.00
IUUC-Eeu-034644	Erinaceus europaeus	62.33	6.00e-76	277.00
IUUC-Fox-037974	Fusarium oxysporum	47.58	5.00e-112	397.00
IUUC-Fso-038246	Fusarium solani	46.17	1.00e-99	356.00
IUUC-Gma-042791	Glycine max	87.80	0.00e+00	763.00
IUUC-Hvu-047457	Hordeum vulgare	96.50	1.00e-114	404.00
IUUC-Kpa-049119	Komagataella pastoris	36.70	5.00e-70	257.00
IUUC-Lch-050545	Latimeria chalumnae	65.85	5.00e-162	563.00
IUUC-Lpe-051337	Leersia perrieri	95.37	0.00e+00	821.00
IUUC-Loc-052473	Lepisosteus oculatus	66.75	2.00e-161	561.00
IUUC-Mtr-057853	Medicago truncatula	87.37	0.00e+00	744.00
IUUC-Mac-065480	Musa acuminata	87.83	0.00e+00	758.00
IUUC-Mpu-066529	Mustela putorius furo	67.00	2.00e-161	561.00
IUUC-Nfi-068374	Neosartorya fischeri	48.04	2.00e-108	385.00
IUUC-Ncr-068794	Neurospora crassa	45.97	2.00e-107	382.00
IUUC-Oba-075719	Oryza barthii	81.04	0.00e+00	699.00
IUUC-Obr-076859	Oryza brachyantha	95.62	0.00e+00	818.00
IUUC-Ogl-077920	Oryza glaberrima	95.12	0.00e+00	817.00
IUUC-Ogu-078048	Oryza glumaepatula	80.81	0.00e+00	695.00
IUUC-Oin-079960	Oryza indica	80.35	0.00e+00	657.00
IUUC-Olo-080553	Oryza longistaminata	77.22	0.00e+00	681.00
IUUC-Ome-081835	Oryza meridionalis	95.35	0.00e+00	825.00
IUUC-Oni-082494	Oryza nivara	80.81	0.00e+00	692.00
IUUC-Opu-083913	Oryza punctata	91.46	0.00e+00	772.00
IUUC-Oru-084666	Oryza rufipogon	95.12	0.00e+00	817.00
IUUC-Osa-085884	Oryza sativa	95.12	0.00e+00	817.00
IUUC-Olu-087579	Ostreococcus lucimarinus	69.47	5.00e-162	563.00
IUUC-Pma-094307	Petromyzon marinus	65.01	8.00e-160	556.00
IUUC-Pop-099709	Populus trichocarpa	88.32	0.00e+00	768.00
IUUC-Pca-100642	Procavia capensis	59.59	3.00e-135	474.00
IUUC-Ppe-101212	Prunus persica	89.00	0.00e+00	774.00
IUUC-Sit-110144	Setaria italica	98.38	0.00e+00	816.00
IUUC-Sly-111680	Solanum lycopersicum	87.71	0.00e+00	762.00
IUUC-Stu-111931	Solanum tuberosum	88.38	0.00e+00	750.00
IUUC-Sar-113236	Sorex araneus	59.25	8.00e-135	473.00
IUUC-Sbi-114637	Sorghum bicolor	97.91	0.00e+00	851.00
IUUC-Tca-121841	Theobroma cacao	87.83	0.00e+00	764.00
IUUC-Tre-122190	Trichoderma reesei	48.06	2.00e-104	372.00
IUUC-Tvi-122304	Trichoderma virens	47.83	6.00e-112	397.00
IUUC-Tae-124648	Triticum aestivum	95.59	0.00e+00	792.00
IUUC-Tur-126850	Triticum urartu	91.38	2.00e-178	617.00
IUUC-Tbe-128010	Tupaia belangeri	59.25	4.00e-135	474.00
IUUC-Vvi-131585	Vitis vinifera	87.83	0.00e+00	769.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence