iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057955

Ensembl Protein ID

KEH27324

UniProt Accession

A0A072UBX5; A0A072UBX5_MEDTR

Genbank Protein ID

KEH27324.1

Protein Name

DNA repair protein REV1

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g004960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g004960	KEH27326	KEH27326
MTR_5g004960	KEH27325	KEH27325
MTR_5g004960	KEH27324	KEH27324

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBM	30.33	2.00e-50	196.00	IUUC-Sce-106236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Medicago truncatula

Functional Description
(View)

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents.

Protein Sequence
(Fasta)

MSLNSCKRAS SSSDANRRKK KQQKTTTTTN QKTLGVAWGK NSSNSTKSPF SDVASYMTEK 60
NRKLHNQFNT EEASTSCGNP IFAGVSIFVD GFTVPSSQEL RGYMLKYGGR FENYFSRHRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCGATCTG ATTCATCTTT TGGTGCGAAA AGTGGTAGAT ACACACAATT CACTCCCTTC 60
CTCAATCGTT GATTAGATTA AGATGAGTTT GAATTCTTGT AAAAGAGCAT CATCATCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0237--DNA synthesis
KW-0238--DNA-binding
KW-0548--Nucleotidyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR001357--BRCT_dom
IPR017961--DNA_pol_Y-fam_little_finger
IPR012112--REV1
IPR001126--UmuC

PROSITE

PS50172--BRCT
PS50173--UMUC

Pfam

PF16589--BRCT_2
PF00817--IMS
PF11799--IMS_C

SMART

SM00292--BRCT

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0016779--F:nucleotidyltransferase activity
GO:0042276--P:error-prone translesion synthesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000375	Aegilops tauschii	39.53	4.00e-96	345.00
IUUC-Aml-001185	Ailuropoda melanoleuca	36.67	1.00e-88	321.00
IUUC-Atr-002915	Amborella trichopoda	47.43	0.00e+00	748.00
IUUC-Apl-004054	Anas platyrhynchos	42.95	1.00e-73	271.00
IUUC-Aca-004304	Anolis carolinensis	35.71	1.00e-87	317.00
IUUC-Aly-005696	Arabidopsis lyrata	51.29	0.00e+00	980.00
IUUC-Ath-006893	Arabidopsis thaliana	52.37	0.00e+00	969.00
IUUC-Ago-007722	Ashbya gossypii	30.75	2.00e-52	199.00
IUUC-Acl-008347	Aspergillus clavatus	32.24	2.00e-98	353.00
IUUC-Afl-008444	Aspergillus flavus	29.97	2.00e-91	330.00
IUUC-Afu-008837	Aspergillus fumigatus	28.98	1.00e-92	334.00
IUUC-Ani-009188	Aspergillus nidulans	34.06	4.00e-80	292.00
IUUC-Ang-009866	Aspergillus niger	31.36	6.00e-96	345.00
IUUC-Aor-010107	Aspergillus oryzae	29.97	2.00e-91	330.00
IUUC-Ate-010359	Aspergillus terreus	34.41	2.00e-81	296.00
IUUC-Ame-010664	Astyanax mexicanus	38.16	4.00e-89	322.00
IUUC-Bgr-012244	Blumeria graminis	37.32	3.00e-78	286.00
IUUC-Bta-013405	Bos taurus	35.76	7.00e-80	291.00
IUUC-Bci-013849	Botrytis cinerea	36.81	3.00e-81	296.00
IUUC-Bdi-014066	Brachypodium distachyon	44.20	0.00e+00	815.00
IUUC-Bol-015544	Brassica oleracea	51.55	0.00e+00	976.00
IUUC-Bra-017792	Brassica rapa	50.05	0.00e+00	965.00
IUUC-Cel-018148	Caenorhabditis elegans	29.92	2.00e-60	227.00
IUUC-Cja-019742	Callithrix jacchus	32.23	7.00e-52	198.00
IUUC-Cfa-020112	Canis familiaris	36.49	4.00e-88	319.00
IUUC-Cpo-022152	Cavia porcellus	35.91	6.00e-87	315.00
IUUC-Cre-022951	Chlamydomonas reinhardtii	40.34	1.00e-71	264.00
IUUC-Csa-023504	Chlorocebus sabaeus	36.78	2.00e-84	307.00
IUUC-Cho-024780	Choloepus hoffmanni	42.37	1.00e-22	101.00
IUUC-Cin-025276	Ciona intestinalis	33.77	2.00e-108	386.00
IUUC-Csv-026283	Ciona savignyi	35.55	7.00e-76	277.00
IUUC-Cgl-026726	Colletotrichum gloeosporioides	35.78	5.00e-83	302.00
IUUC-Cne-027079	Cryptococcus neoformans	33.55	8.00e-67	248.00
IUUC-Cme-027346	Cyanidioschyzon merolae	29.17	2.00e-68	254.00
IUUC-Dre-028073	Danio rerio	43.83	1.00e-74	274.00
IUUC-Dno-030038	Dasypus novemcinctus	36.17	3.00e-88	319.00
IUUC-Dor-031100	Dipodomys ordii	35.11	4.00e-79	289.00
IUUC-Dse-031310	Dothistroma septosporum	30.40	5.00e-83	302.00
IUUC-Dme-031991	Drosophila melanogaster	33.73	5.00e-76	278.00
IUUC-Ete-033082	Echinops telfairi	31.86	1.00e-65	244.00
IUUC-Eca-033471	Equus caballus	35.80	1.00e-86	314.00
IUUC-Eeu-034993	Erinaceus europaeus	42.63	1.00e-72	267.00
IUUC-Fca-035367	Felis catus	35.18	5.00e-89	322.00
IUUC-Fal-036973	Ficedula albicollis	36.21	1.00e-81	297.00
IUUC-Fox-037677	Fusarium oxysporum	35.80	1.00e-77	284.00
IUUC-Fso-038252	Fusarium solani	31.12	9.00e-99	354.00
IUUC-Gmo-039669	Gadus morhua	36.56	7.00e-85	308.00
IUUC-Ggr-039988	Gaeumannomyces graminis	34.24	2.00e-78	287.00
IUUC-Gga-040423	Gallus gallus	43.57	2.00e-73	270.00
IUUC-Gac-042134	Gasterosteus aculeatus	38.46	1.00e-83	304.00
IUUC-Gma-042929	Glycine max	72.70	0.00e+00	1582.00
IUUC-Ggo-044528	Gorilla gorilla	36.85	3.00e-85	310.00
IUUC-Hsa-046259	Homo sapiens	36.85	3.00e-85	309.00
IUUC-Hvu-047139	Hordeum vulgare	63.30	3.00e-115	408.00
IUUC-Itr-048621	Ictidomys tridecemlineatus	37.55	9.00e-89	321.00
IUUC-Kpa-049169	Komagataella pastoris	32.39	2.00e-64	239.00
IUUC-Lch-050471	Latimeria chalumnae	44.20	1.00e-77	284.00
IUUC-Lpe-050800	Leersia perrieri	46.06	0.00e+00	880.00
IUUC-Loc-052320	Lepisosteus oculatus	28.46	1.00e-47	184.00
IUUC-Lma-053149	Leptosphaeria maculans	35.71	1.00e-81	298.00
IUUC-Laf-053810	Loxodonta africana	36.44	2.00e-81	297.00
IUUC-Mcc-055574	Macaca mulatta	36.65	1.00e-83	304.00
IUUC-Meu-055945	Macropus eugenii	29.58	3.00e-30	127.00
IUUC-Mor-057195	Magnaporthe oryzae	34.02	1.00e-82	300.00
IUUC-Mpo-057488	Magnaporthe poae	30.78	4.00e-91	329.00
IUUC-Mla-059027	Melampsora laricipopulina	35.11	2.00e-67	250.00
IUUC-Mga-060156	Meleagris gallopavo	30.46	4.00e-93	335.00
IUUC-Mvi-060398	Microbotryum violaceum	34.62	1.00e-74	274.00
IUUC-Mmr-061113	Microcebus murinus	36.04	1.00e-83	304.00
IUUC-Mdo-063001	Monodelphis domestica	35.40	2.00e-79	290.00
IUUC-Mmu-063180	Mus musculus	36.80	1.00e-83	304.00
IUUC-Mac-065551	Musa acuminata	41.41	4.00e-141	494.00
IUUC-Mpu-066525	Mustela putorius furo	36.38	3.00e-88	319.00
IUUC-Mlu-067877	Myotis lucifugus	36.72	4.00e-84	306.00
IUUC-Nfi-068418	Neosartorya fischeri	29.05	4.00e-95	342.00
IUUC-Ncr-068648	Neurospora crassa	30.79	4.00e-96	345.00
IUUC-Nle-069959	Nomascus leucogenys	36.85	5.00e-85	309.00
IUUC-Opr-070522	Ochotona princeps	36.41	1.00e-64	241.00
IUUC-Ont-072293	Oreochromis niloticus	32.08	2.00e-72	267.00
IUUC-Oan-073519	Ornithorhynchus anatinus	35.54	2.00e-88	320.00
IUUC-Ocu-074492	Oryctolagus cuniculus	36.22	3.00e-86	313.00
IUUC-Oba-075567	Oryza barthii	46.41	0.00e+00	864.00
IUUC-Obr-076332	Oryza brachyantha	45.87	0.00e+00	825.00
IUUC-Ogl-077348	Oryza glaberrima	46.37	0.00e+00	893.00
IUUC-Ogu-078779	Oryza glumaepatula	46.23	0.00e+00	859.00
IUUC-Oin-079738	Oryza indica	43.71	0.00e+00	817.00
IUUC-Olo-080701	Oryza longistaminata	44.33	0.00e+00	818.00
IUUC-Ome-081708	Oryza meridionalis	45.25	0.00e+00	805.00
IUUC-Oni-082251	Oryza nivara	45.83	0.00e+00	853.00
IUUC-Opu-083528	Oryza punctata	45.25	0.00e+00	850.00
IUUC-Oru-084293	Oryza rufipogon	46.05	0.00e+00	839.00
IUUC-Osa-085549	Oryza sativa	46.46	0.00e+00	892.00
IUUC-Ola-086793	Oryzias latipes	30.72	8.00e-78	285.00
IUUC-Olu-087786	Ostreococcus lucimarinus	34.94	3.00e-73	268.00
IUUC-Oga-089006	Otolemur garnettii	43.89	1.00e-75	278.00
IUUC-Oar-089597	Ovis aries	35.97	3.00e-85	310.00
IUUC-Ptr-091520	Pan troglodytes	36.85	4.00e-85	309.00
IUUC-Pan-092333	Papio anubis	36.65	6.00e-84	305.00
IUUC-Psi-094004	Pelodiscus sinensis	43.26	6.00e-74	272.00
IUUC-Pma-094128	Petromyzon marinus	36.45	7.00e-50	191.00
IUUC-Pno-094849	Phaeosphaeria nodorum	35.47	2.00e-78	287.00
IUUC-Ppa-095714	Physcomitrella patens	39.45	0.00e+00	729.00
IUUC-Pfo-096569	Poecilia formosa	34.76	8.00e-76	278.00
IUUC-Pab-097960	Pongo abelii	37.06	4.00e-85	309.00
IUUC-Pop-098921	Populus trichocarpa	51.84	0.00e+00	1057.00
IUUC-Pca-100509	Procavia capensis	32.87	9.00e-55	208.00
IUUC-Ppe-101730	Prunus persica	55.48	0.00e+00	1116.00
IUUC-Pva-102142	Pteropus vampyrus	35.85	2.00e-83	303.00
IUUC-Pgr-103446	Puccinia graminis	31.48	3.00e-49	189.00
IUUC-Ptt-103849	Puccinia triticina	27.07	1.00e-67	251.00
IUUC-Pte-104128	Pyrenophora teres	37.24	6.00e-84	305.00
IUUC-Pyt-104754	Pyrenophora triticirepentis	31.24	3.00e-95	342.00
IUUC-Rno-104871	Rattus norvegicus	36.59	7.00e-87	315.00
IUUC-Sce-106236	Saccharomyces cerevisiae	30.33	3.00e-51	196.00
IUUC-Sha-106962	Sarcophilus harrisii	35.33	4.00e-80	292.00
IUUC-Sja-107691	Schizosaccharomyces japonicus	39.81	4.00e-73	269.00
IUUC-Spo-108170	Schizosaccharomyces pombe	37.21	2.00e-68	253.00
IUUC-Ssl-108668	Sclerotinia sclerotiorum	35.82	9.00e-87	315.00
IUUC-Smo-109554	Selaginella moellendorffii	42.96	2.00e-176	612.00
IUUC-Sit-110479	Setaria italica	43.04	0.00e+00	641.00
IUUC-Sly-111752	Solanum lycopersicum	50.88	0.00e+00	1026.00
IUUC-Stu-112284	Solanum tuberosum	27.20	2.00e-30	127.00
IUUC-Sar-113304	Sorex araneus	37.01	4.00e-86	312.00
IUUC-Sbi-114196	Sorghum bicolor	50.37	6.00e-152	531.00
IUUC-Sre-115151	Sporisorium reilianum	32.14	6.00e-69	255.00
IUUC-Ssc-116104	Sus scrofa	35.31	4.00e-83	303.00
IUUC-Tgu-117438	Taeniopygia guttata	43.26	5.00e-74	272.00
IUUC-Tru-118553	Takifugu rubripes	43.44	2.00e-72	266.00
IUUC-Tsy-119056	Tarsius syrichta	38.73	3.00e-87	316.00
IUUC-Tni-119933	Tetraodon nigroviridis	32.08	1.00e-109	391.00
IUUC-Tca-121376	Theobroma cacao	54.01	0.00e+00	1174.00
IUUC-Tre-121972	Trichoderma reesei	32.34	3.00e-92	333.00
IUUC-Tvi-122342	Trichoderma virens	32.68	5.00e-96	345.00
IUUC-Tae-123898	Triticum aestivum	49.29	0.00e+00	764.00
IUUC-Tur-126735	Triticum urartu	34.32	4.00e-149	521.00
IUUC-Tme-126999	Tuber melanosporum	33.91	9.00e-75	275.00
IUUC-Tbe-127280	Tupaia belangeri	48.48	7.00e-32	132.00
IUUC-Ttr-129104	Tursiops truncatus	36.19	7.00e-83	301.00
IUUC-Uma-129562	Ustilago maydis	32.14	5.00e-67	249.00
IUUC-Vda-129862	Verticillium dahliae	37.04	5.00e-86	312.00
IUUC-Vpa-130819	Vicugna pacos	35.50	4.00e-45	176.00
IUUC-Vvi-131111	Vitis vinifera	55.64	0.00e+00	1134.00
IUUC-Xtr-132629	Xenopus tropicalis	34.49	7.00e-77	281.00
IUUC-Xma-134065	Xiphophorus maculatus	34.96	4.00e-76	279.00
IUUC-Yli-134633	Yarrowia lipolytica	29.81	2.00e-59	224.00
IUUC-Zma-135176	Zea mays	47.05	0.00e+00	818.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence