iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006874

UUCD1 version

UUC-ArT-00975

Ensembl Protein ID

AT3G18950.1

UniProt Accession

Q9LJ71; Q9LJ71_ARATH

Genbank Protein ID

AAO63854.1; AEE76172.1; BAB01691.1; BAC42304.1

Protein Name

En/Spm-like transposon protein-like; Putative uncharacterized protein At3g18950; Putative uncharacterized protein At3g18950/K13E13_5; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

BT005434; CP002686; AP000735; AK117650

Gene Name

At3g18950; At3g18950/K13E13_5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G18950	AT3G18950.1	AT3G18950.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-30	102.4	248	285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v+cl++  + +ll sGs+D+t+kvW+l++ ++l 
   Q: 248  HYDAVSCLSLnEElGLLYSGSWDKTLKVWRLSDSKCLE 285
           7899******544899*****************99986 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MVIATETTSS SHHRRLTFAS FLNSDPAADE EEQSHGVDDI INPSSSNKNI NKDVHHNYRQ 60
SQSNASTTSG ESSPNQVLSP WNQTYSPYYT DTTNTPSMSP SPWNQTYSPY YKSPWIYQTR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTATTAAC TAATTAATAC TAATATTCTT GATTAACACG GTCTCATGTG AAAACTGGCG 60
CTGCCGGAAT CTGACGGTCA CGTCTTCAGT CTAAAACGCC ACGTGTCATT CACCCACGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ath:AT3G18950

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015603	Brassica oleracea	84.78	0.00e+00	713.00
IUUC-Bra-018073	Brassica rapa	84.57	0.00e+00	719.00
IUUC-Gma-042921	Glycine max	54.20	5.00e-124	437.00
IUUC-Mtr-057793	Medicago truncatula	58.82	2.00e-136	478.00
IUUC-Pop-099212	Populus trichocarpa	64.77	3.00e-159	554.00
IUUC-Sly-111118	Solanum lycopersicum	63.29	3.00e-134	470.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence