iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112572

Ensembl Protein ID

PGSC0003DMT400066737

UniProt Accession

M1CG37; M1CG37_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400025932	PGSC0003DMT400066736	PGSC0003DMT400066736
PGSC0003DMG400025932	PGSC0003DMT400066737	PGSC0003DMT400066737

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-31	108.0	229	266
UBD/Beta-Prp	8.00e-43	148.0	125	390

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v+c+++  + +ll sGs+D+t+kvW+l++ ++l 
   Q: 229  HFDAVSCMSLdKErGLLYSGSWDKTLKVWRLSDSKCLE 266
           8899******86679******************99986 PP

UBD/Beta-Prp

   S: 15   cvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls..................... 82
           +++   +++ll tgs+++ i+vw++ +    + ++ +++ v+a+    d   + tg++D+ i+vw +                      
   Q: 125  SLAA--SGDLLYTGSDSKNIRVWKNLK--EYSGFKCQSGLVKAIVVYGD--KIFTGHQDGKIRVWKFLgkkrkaykrvgslptvrdylk 207
           4444..899****************99..45799999999*******99..69************555556667779999999999999 PP
   S: 83   ............tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr 159
                        +  v  + +h d v ++s+++++  l sGs+d+t++vw l+  +cle   + h++++n+vvv +++ l+++Gs+D+
   Q: 208  ssinpkayvevrRNRNVPWI-KHFDAVSCMSLDKERGLLYSGSWDKTLKVWRLSDSKCLE-SINAHQDAINSVVV-GFDGLVFTGSADG 293
           99966666666444444444.6**************************************.66677777777665.4579********* PP
   S: 160  tvrlWdl......ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsg 240
           tv+ W+       +   l++tl + ++++v+sl+++     + +gs dg v++w+ q+       +l+gh+  v++v++   +++++sg
   Q: 294  TVKAWRRelvgnsAKHVLVETLLK-QDSAVTSLAVNAAAATVYAGSSDGLVNFWERQKHFLeyGGALRGHKLAVLCVAVA--GNLVLSG 379
           ***********999999******9.*******************************9654422679**************..******* PP
   S: 241  ssDgsiriWdl 251
           s+D+si +W  
   Q: 380  SADKSICVWRR 390
           *********54 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MTRKNNSMGA ILLQKESFRR TKFGTLLYSD PISDHEESSN NSARSSNASS APSPPRTSSF 60
NGTNTTSNNN SPNYFMSPWN QSASPYVKSP WIHQPLLDSS EESESSDCKN GLIGSLVREE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTCTTCCA TTACTCTATT CACAAACCTC TACATTTATT ACAAACCAAA TTCACTCCAA 60
AAAGATTCAA ATCAACAATC ATAATTCATA CCTACCATCA TTCAATTCAT CTTTGTTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006874	Arabidopsis thaliana	64.68	1.00e-133	468.00
IUUC-Bol-016061	Brassica oleracea	62.44	2.00e-128	451.00
IUUC-Gma-042921	Glycine max	56.44	1.00e-123	434.00
IUUC-Pop-099212	Populus trichocarpa	62.75	2.00e-156	544.00
IUUC-Sly-111118	Solanum lycopersicum	96.13	0.00e+00	757.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence