iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099580

Ensembl Protein ID

POPTR_0004s14000.1

UniProt Accession

B9H410; B9H410_POPTR

Genbank Protein ID

EEE85851.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_714526; POPTR_0004s14020g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s14000	POPTR_0004s14000.1	POPTR_0004s14000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/Cullin	5.40e-79	267.7	119	454

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/Cullin

   S: 1    klreavkkilrqesvkkeyeelytavynlclskvgaklYkklkevleefi.kqvkkkveesedeq.lLktynreWekfreqlkvlrkifay 89
           kl++a+k+i  ++    ++e+ly+av +lcl+k+g +lY ++++ +e +i +++++ v +s d   +Lk ++++W++ + q+ ++r+i +y
   Q: 119  KLQSAIKAIFLKQPALCDLEKLYQAVNDLCLHKMGGNLYLRIEKECETHIsAALQSLVGQSPDLVvFLKLVEECWHDLCDQMLMIRSIALY 209
           5899**********************************************888999*******999************************* PP
   S: 90   ldrtyvkkskkvsevrkLaldlwrkeived..ikkrllelllklieaeRkgeavdrrllsgvveslveLslnklaiykesFEakfleatqe 178
           ldrtyvk++ +  + ++++l+l+rk++  +  ++++++  ll++ie+eR ge+v+r+ l  + +++ +L+     iy esFE +fle t+e
   Q: 210  LDRTYVKQTPNARSLWDMGLQLFRKHLSLSpeVEHKTVTGLLQMIERERLGETVNRKPLGHLLKMFTSLG-----IYAESFERPFLECTSE 295
           **************************987778*************************************6.....**************** PP
   S: 179  fykaesaeflqenevdeYlkkvearlneeeeraaryleestetkLlevvekeliakhlesll.aelvallrdkktedlsrmykLlsrvlng 268
           fy+ae   ++q+++v +Ylk+ve+rlnee++r++ yl++st+++L+++ e++l++ h+ ++l +++  l++ ++ edl+r+y+L+ rv n 
   Q: 296  FYAAEGMTYMQQSDVPDYLKHVESRLNEEQDRCKIYLDSSTKKPLIATAERQLLERHISAILdKGFMMLMNGHRIEDLKRIYSLFLRV-NA 385
           **************************************************************999**********************9.68 PP
   S: 269  leellkeleshikeqgkaaltaeekekdpkkyVerllelknklqklvseaFnndakFlkaldkafetfvnkn 340
           le l++ l+ +i+  g+ ++++eek+kd   +V +lle+k  l+++ +e+F++++ F  +++ a+e+ +n +
   Q: 386  LESLRQALSMYIRRTGQGIVMDEEKDKD---MVSSLLEFKACLDSIWEESFSKNEGFCITVKDAYEHLINLR 454
           ****************************...***************************************76 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSLPTKRSAT TSASTSTAST SASNSFLPMK KAKSQAASAC SPLDHNKNGL YHSDDVVFDP 60
SSMSLDDDLK LVDYRTPPAA ANLSRKKATP PQPAKKLVIK LVKAKPTLPT NFEEDTWAKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCTCC CCACCAAACG CTCAGCCACA ACCAGCGCCA GCACTAGCAC AGCCAGCACT 60
TCCGCCTCAA ATAGTTTCCT TCCAATGAAG AAGGCCAAGT CCCAGGCCGC CTCCGCCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016157--Cullin_CS
IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS01256--CULLIN_1
PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0004s14020g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024959	Choloepus hoffmanni	47.21	1.00e-89	323.00
IUUC-Dor-030296	Dipodomys ordii	47.48	4.00e-90	325.00
IUUC-Meu-056492	Macropus eugenii	44.41	8.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence