iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017484

Ensembl Protein ID

Bra008979.1-P

UniProt Accession

M4CXN2; M4CXN2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra008979	Bra008979.1	Bra008979.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-07	32.5	196	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGs.dDgtikvWD 29
           gH ++v+c+af  d ++++s++ +   i vW 
   Q: 196  GHPGGVRCVAFtEDgKFILSSAvGERYIAVWK 227
           899********9555887665559999****8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNLVNIKDVL TSFSPALDYL ALSTGDGRIK IWDTVKGQVQ TEFADIASAE ETNIYTSGGK 60
GHLSVDYTCM KWLSLERKKK RKLGTSILVL GTGGGDVLAL DVASGQLKWR ISDCHPGGVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTTGG TGAACATTAA GGATGTGTTG ACTTCTTTCA GTCCTGCTCT TGATTATCTA 60
GCTCTTAGCA CCGGAGATGG TCGTATCAAG GTACCCTTCA GCTTTCTTCA CTTGTGGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006074	Arabidopsis lyrata	88.98	0.00e+00	928.00
IUUC-Ath-007222	Arabidopsis thaliana	88.68	0.00e+00	932.00
IUUC-Bdi-014072	Brachypodium distachyon	47.12	2.00e-140	492.00
IUUC-Bol-016255	Brassica oleracea	93.04	0.00e+00	1137.00
IUUC-Cpo-022456	Cavia porcellus	27.94	5.00e-23	102.00
IUUC-Dre-028051	Danio rerio	31.64	2.00e-22	100.00
IUUC-Eeu-034970	Erinaceus europaeus	27.89	2.00e-07	51.20
IUUC-Lch-049553	Latimeria chalumnae	23.37	4.00e-23	102.00
IUUC-Mtr-057977	Medicago truncatula	56.80	5.00e-175	607.00
IUUC-Mdo-061972	Monodelphis domestica	24.11	1.00e-25	110.00
IUUC-Ont-072093	Oreochromis niloticus	24.32	6.00e-30	125.00
IUUC-Oba-075009	Oryza barthii	46.60	4.00e-134	471.00
IUUC-Ogl-077189	Oryza glaberrima	44.24	1.00e-132	466.00
IUUC-Oin-079064	Oryza indica	46.77	3.00e-134	471.00
IUUC-Opu-083604	Oryza punctata	46.15	4.00e-133	468.00
IUUC-Oru-084620	Oryza rufipogon	46.77	9.00e-135	473.00
IUUC-Osa-085345	Oryza sativa	46.77	2.00e-134	473.00
IUUC-Pma-094287	Petromyzon marinus	22.61	7.00e-24	105.00
IUUC-Ppa-095327	Physcomitrella patens	39.89	5.00e-68	251.00
IUUC-Pop-099418	Populus trichocarpa	60.66	0.00e+00	654.00
IUUC-Ppe-101779	Prunus persica	61.31	0.00e+00	684.00
IUUC-Sly-111365	Solanum lycopersicum	56.08	4.00e-170	591.00
IUUC-Stu-112812	Solanum tuberosum	56.08	8.00e-170	590.00
IUUC-Sar-113326	Sorex araneus	29.55	5.00e-21	95.90
IUUC-Sbi-114426	Sorghum bicolor	46.79	5.00e-144	504.00
IUUC-Tru-117848	Takifugu rubripes	24.50	3.00e-28	120.00
IUUC-Tni-120591	Tetraodon nigroviridis	24.67	6.00e-28	119.00
IUUC-Tca-121576	Theobroma cacao	60.14	0.00e+00	683.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence