iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-125207

Ensembl Protein ID

TRIAE_CS42_5BL_TGACv1_404160_AA1287480.1

UniProt Accession

W5FH53; W5FH53_WHEAT

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_5BL_TGACv1_404160_AA1287480	TRIAE_CS42_5BL_TGACv1_404160_AA1287480.1	TRIAE_CS42_5BL_TGACv1_404160_AA1287480.1
TRIAE_CS42_5BL_TGACv1_404160_AA1287480	TRIAE_CS42_5BL_TGACv1_404160_AA1287480.2	TRIAE_CS42_5BL_TGACv1_404160_AA1287480.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.50e-18	68.8	165	205
ULD/UDP/UBQ/UBQ_PIM	4.60e-23	83.6	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           e  ++ + eMG   +dr+++l+aLraa+nn+e+AveyL++g
   Q: 165  EATIQSILEMGggtWDRDTVLRALRAAFNNPERAVEYLYSG 205
           6789**********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvh 68
           mk+ vktlkg++fe+ev++ d+v+++K++i++++g   +p++qq LIy+G +LkD+ttL+e+++ ++++++
   Q: 1    MKVSVKTLKGSKFEIEVNPADKVSDVKKLIESSQGqnvYPADQQMLIYQGSVLKDETTLEENKVVENNFLV 71
           99********************************************************************* PP
   S: 69   lvvkksk 75
           ++++++k
   Q: 72   IMLRQNK 78
           ****987 PP

Organism

Triticum aestivum

Protein Sequence
(Fasta)

MKVSVKTLKG SKFEIEVNPA DKVSDVKKLI ESSQGQNVYP ADQQMLIYQG SVLKDETTLE 60
ENKVVENNFL VIMLRQNKGS SSAAPAKSKE PSNQAPPTQT VPATPASQAP ATPAPQAVAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGTGTTAA AAATACAACA AACTAGAGGG GTTAACCCGC AAAACCACCC GTCCACGCAC 60
GGTGCGCCAG GGGGCCCAAA TAAAAAACAA AACAGAGAAA ACTCGCCGCC TCCTTGTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003116	Amborella trichopoda	68.38	2.00e-80	292.00
IUUC-Aly-005498	Arabidopsis lyrata	65.34	4.00e-82	298.00
IUUC-Bol-016493	Brassica oleracea	64.37	1.00e-85	310.00
IUUC-Bra-017582	Brassica rapa	64.37	2.00e-85	309.00
IUUC-Lpe-051087	Leersia perrieri	82.87	5.00e-112	398.00
IUUC-Oba-075392	Oryza barthii	80.48	3.00e-109	389.00
IUUC-Ogu-078883	Oryza glumaepatula	80.48	2.00e-109	389.00
IUUC-Oin-079817	Oryza indica	80.08	1.00e-108	387.00
IUUC-Olo-080929	Oryza longistaminata	80.08	6.00e-109	387.00
IUUC-Ome-081866	Oryza meridionalis	80.48	2.00e-109	389.00
IUUC-Oni-083092	Oryza nivara	80.08	1.00e-108	387.00
IUUC-Opu-083756	Oryza punctata	83.06	8.00e-111	394.00
IUUC-Oru-084816	Oryza rufipogon	80.08	1.00e-108	387.00
IUUC-Osa-086112	Oryza sativa	80.08	1.00e-108	387.00
IUUC-Pfo-096607	Poecilia formosa	32.76	2.00e-38	153.00
IUUC-Smo-109518	Selaginella moellendorffii	54.98	4.00e-59	222.00
IUUC-Sly-111480	Solanum lycopersicum	60.87	1.00e-120	427.00
IUUC-Stu-112054	Solanum tuberosum	60.87	1.00e-118	419.00
IUUC-Vvi-130842	Vitis vinifera	66.53	9.00e-89	320.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence