iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131159

UUCD1 version

UUC-ViV-00751

Ensembl Protein ID

VIT_10s0003g01730.t01

UniProt Accession

F6HMC1; F6HMC1_VITVI

Genbank Protein ID

CCB55709.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595992

Gene Name

PUB17; VIT_10s0003g01730

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_10s0003g01730	VIT_10s0003g01730.t01	VIT_10s0003g01730.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.30e-32	109.8	265	336

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vp++f+CpIsl++MrdPv++++G+tydr+sI +w+++g+ +cP+t+q l++  lvPn +lr+li +wc + +
   Q: 265  VPKDFCCPISLDVMRDPVIISTGQTYDRTSISRWMEEGHCSCPKTGQMLAHPRLVPNRALRNLITQWCTAYG 336
           8*******************************************************************9865 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MASAAIVSSL RRRRSPSLEA FLAPVDLNEV ALVRTLATIS MELIFAFSDR PWPFQRKNSR 60
SLIRKIEVFL VLLEFLRDCN LSLPSAAVLC FKELYLLLYR SKILLDYCLQ SSKLWLLLQN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAGAAACGA GATTCAGACA AGTAGTAGAA TCACACACAA AAATAAACAA TAAGTGTAAG 60
AGAGTTGCAC TGTTTTCCTT GTTTTTGTTT TTATTGTTTT GTTTTTTGTT TCTGGGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001129	Aegilops tauschii	50.27	3.00e-139	488.00
IUUC-Aly-006027	Arabidopsis lyrata	68.58	0.00e+00	865.00
IUUC-Ath-007054	Arabidopsis thaliana	67.87	0.00e+00	865.00
IUUC-Bdi-014675	Brachypodium distachyon	48.50	2.00e-147	514.00
IUUC-Bol-015991	Brassica oleracea	67.06	0.00e+00	757.00
IUUC-Bra-017149	Brassica rapa	64.51	0.00e+00	827.00
IUUC-Gma-043020	Glycine max	73.43	0.00e+00	944.00
IUUC-Hvu-047822	Hordeum vulgare	48.35	7.00e-155	540.00
IUUC-Lch-050386	Latimeria chalumnae	40.30	2.00e-10	59.30
IUUC-Lpe-051105	Leersia perrieri	48.25	5.00e-142	497.00
IUUC-Mtr-057764	Medicago truncatula	73.94	0.00e+00	916.00
IUUC-Mac-065609	Musa acuminata	53.71	6.00e-178	616.00
IUUC-Oba-075480	Oryza barthii	51.32	2.00e-137	481.00
IUUC-Obr-076773	Oryza brachyantha	54.64	5.00e-87	313.00
IUUC-Ogl-077156	Oryza glaberrima	48.89	1.00e-149	523.00
IUUC-Ogu-078640	Oryza glumaepatula	48.89	9.00e-150	523.00
IUUC-Oin-079253	Oryza indica	46.82	7.00e-138	483.00
IUUC-Olo-080903	Oryza longistaminata	51.13	3.00e-137	481.00
IUUC-Ome-081982	Oryza meridionalis	48.73	6.00e-149	520.00
IUUC-Oni-082824	Oryza nivara	48.89	9.00e-150	523.00
IUUC-Opu-083758	Oryza punctata	47.93	7.00e-146	509.00
IUUC-Oru-084718	Oryza rufipogon	48.89	9.00e-150	523.00
IUUC-Osa-085662	Oryza sativa	50.09	2.00e-143	501.00
IUUC-Pop-099239	Populus trichocarpa	75.46	0.00e+00	928.00
IUUC-Ppe-101890	Prunus persica	76.22	0.00e+00	915.00
IUUC-Sit-110022	Setaria italica	49.68	4.00e-147	514.00
IUUC-Sly-111463	Solanum lycopersicum	71.88	0.00e+00	885.00
IUUC-Stu-111976	Solanum tuberosum	71.47	0.00e+00	881.00
IUUC-Sbi-114100	Sorghum bicolor	49.37	4.00e-149	521.00
IUUC-Tca-121221	Theobroma cacao	76.71	0.00e+00	991.00
IUUC-Tae-124437	Triticum aestivum	48.50	5.00e-155	540.00
IUUC-Tur-126627	Triticum urartu	51.79	3.00e-133	467.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence