iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099586

UUCD1 version

UUC-PoT-01537

Ensembl Protein ID

POPTR_0012s01250.1

UniProt Accession

A9PCS3; A9PCS3_POPTR

Genbank Protein ID

ABK94176.1; ABK95178.1; EEE95962.1; ERP52121.1

Protein Name

Ubiquitin conjugating-like enzyme family protein; Ubiquitin-conjugating enzyme E2-17 kDa 10/12 family protein

Genbank Nucleotide ID

EF146072; EF147148; CM000348; CM000351

Gene Name

POPTR_0012s01250g; POPTR_0015s06060g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s01250	POPTR_0012s01250.1	POPTR_0012s01250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.00e-56	191.7	5	139
UBD/UBC-like/UBD_UBC	2.30e-75	252.4	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY+ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQ 92
           899*********************.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           Wspal++++vllsi+sll++pnp++pl  e+a+++k++r++y++++r
   Q: 93   WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTAR 139
           *******************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsa 91
           ri kelkdl++d+++ +sa++v +d+f+++ati+gppdspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws+
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSP 95
           899**************************************************************************************** PP
   S: 92   altlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           alt+skvlls+csll+d++pddplv+eia++yktd++ky+ +ar wt
   Q: 96   ALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWT 142
           **********************************************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYAGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTCCACCAA TTTATAATAA TATAAAGTCC TCACCTTACA GATTCCCTAA TTTCACTCTT 60
TCTTTTCCCC TTTTCCTTCT CCCCACCCTC CATTCCCCTC CCTCTATCTC ATCAAACAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

pop:POPTR_0012s01250g; pop:POPTR_0015s06060g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002861	Amborella trichopoda	99.32	2.00e-85	306.00
IUUC-Cel-018362	Caenorhabditis elegans	79.59	4.00e-70	256.00
IUUC-Dme-031594	Drosophila melanogaster	80.27	4.00e-70	255.00
IUUC-Gac-042516	Gasterosteus aculeatus	80.95	1.00e-69	254.00
IUUC-Gma-043923	Glycine max	99.32	8.00e-86	308.00
IUUC-Lpe-051194	Leersia perrieri	95.95	3.00e-83	300.00
IUUC-Mac-065077	Musa acuminata	98.65	3.00e-85	306.00
IUUC-Oba-075924	Oryza barthii	95.95	8.00e-83	298.00
IUUC-Ogu-078581	Oryza glumaepatula	95.95	8.00e-83	298.00
IUUC-Ome-081967	Oryza meridionalis	95.95	9.00e-83	298.00
IUUC-Oni-082445	Oryza nivara	95.95	7.00e-83	298.00
IUUC-Olu-087615	Ostreococcus lucimarinus	81.63	5.00e-70	255.00
IUUC-Ppe-101885	Prunus persica	100.00	2.00e-86	310.00
IUUC-Smo-108911	Selaginella moellendorffii	97.97	3.00e-84	303.00
IUUC-Sly-111571	Solanum lycopersicum	98.65	2.00e-85	306.00
IUUC-Stu-112764	Solanum tuberosum	98.65	2.00e-85	306.00
IUUC-Tca-121008	Theobroma cacao	100.00	4.00e-86	309.00
IUUC-Tbe-127329	Tupaia belangeri	71.43	2.00e-61	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence