iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+++  k+ +++ p C+H+fhadC+  w       + + +CP+Cr
   Q: 330  CAICLSEYepKETLRTIPqCQHCFHADCIDEW------LKLNGTCPVCR 372
           ******9977665888889*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MDLTKLISFS LLFLSLLIPT TTTTTSTVTC TNAVCRRDGP IIRFPFRLKH QQSHSCGYDK 60
GFDLTCDINA GNRTTITLPF SGNFTVEEID YAAQEIWIND PNNCLPQRIL QLNLNSTPFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTGGGACC AATCCAATTA CAAAAAGGGT TTCGTCACTG CTTTAGTTTC CAACACCAAA 60
CCAAACAAAA AAATGGATTT AACAAAATTA ATATCATTCT CTCTCTTGTT TCTATCTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR025287--WAK_GUB
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13947--GUB_WAK_bind
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016301--F:kinase activity
GO:0030247--F:polysaccharide binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G53110

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005537	Arabidopsis lyrata	95.90	2.00e-67	246.00
IUUC-Bol-016427	Brassica oleracea	82.47	4.00e-174	603.00
IUUC-Bra-017394	Brassica rapa	82.85	4.00e-172	596.00
IUUC-Gma-043445	Glycine max	46.15	5.00e-86	310.00
IUUC-Mtr-057786	Medicago truncatula	47.86	1.00e-89	322.00
IUUC-Olu-087781	Ostreococcus lucimarinus	42.03	1.00e-12	65.10
IUUC-Pop-099589	Populus trichocarpa	54.75	4.00e-108	384.00
IUUC-Ppe-101955	Prunus persica	53.06	8.00e-88	316.00
IUUC-Pgr-103360	Puccinia graminis	38.10	3.00e-12	63.20
IUUC-Sly-111586	Solanum lycopersicum	56.36	1.00e-95	342.00
IUUC-Stu-112594	Solanum tuberosum	57.43	3.00e-98	351.00
IUUC-Tca-120919	Theobroma cacao	59.71	1.00e-107	382.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence