iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111334

Ensembl Protein ID

Solyc03g095210.1.1

UniProt Accession

K4BIU6; K4BIU6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g095210.1	Solyc03g095210.1.1	Solyc03g095210.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-21	75.7	265	294

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H ++v+++++ s+ + l+sG++D+ +++WD
   Q: 265  HRGEVCGVKWsSTgNALASGGNDNLVYIWD 294
           99********9777**************** PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MNDNSLTKIQ PDWYSPTRLH DTPLDYDFPG DRFIPNRSLM DLHQAHTLLT NRTNNKLQKP 60
NFNDEYRRKM EESLKLDVEG RPFRMLVFRG SPKWSRNSTR LIDEMRRSDK EIPLQINENR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATGACA ATTCATTAAC AAAAATTCAA CCAGATTGGT ATTCTCCAAC TCGACTTCAC 60
GATACTCCGC TCGACTATGA TTTTCCTGTA ATTAATCAAT CCATACTATG CGTTTTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043406	Glycine max	58.59	3.00e-160	556.00
IUUC-Mtr-057975	Medicago truncatula	58.67	2.00e-149	521.00
IUUC-Mac-064491	Musa acuminata	51.90	3.00e-112	397.00
IUUC-Pop-099291	Populus trichocarpa	57.57	2.00e-146	511.00
IUUC-Ppe-101170	Prunus persica	55.97	5.00e-138	483.00
IUUC-Stu-112271	Solanum tuberosum	92.02	0.00e+00	904.00
IUUC-Tca-120916	Theobroma cacao	59.29	4.00e-162	565.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence