iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130884

UUCD1 version

UUC-ViV-00401

Ensembl Protein ID

VIT_17s0000g08080.t01

UniProt Accession

F6GSS2; F6GSS2_VITVI

Genbank Protein ID

CCB42995.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN594950

Gene Name

VIT_17s0000g08080

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_17s0000g08080	VIT_17s0000g08080.t01	VIT_17s0000g08080.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-31	108.4	273	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           pe+f+CpIslelM+dPv++++G+tydrssI+kwl+ g+  cP+t+++l +++lvPn +lr+liq++ce++++
   Q: 273  PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLRAGNIICPKTGEKLINKELVPNSALRKLIQQFCEDHGV 344
           89*******************************************************************986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MFQSFNRSDR RILSFPAVHP CESISPVTLL GSLIALSTSI LNYQSKSFPT QKRNARETLR 60
QIGILLIFFE EIQDRRSVLP DSVVLCFSEL HLAFQKIQFL LEDCSREGAR LWILMKSQFV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATACAGAG CTCCTGTGTC TTTTCCTATT TCTTCTTCAA TGTTTCAAAG TTTTAACCGG 60
TCCGACCGCC GTATTCTCAG TTTTCCGGCG GTTCACCCCT GCGAAAGCAT TTCTCCAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR020003--ATPase_a/bsu_AS
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS00152--ATPASE_ALPHA_BETA
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100241707

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	40.04	1.00e-100	358.00
IUUC-Bdi-014095	Brachypodium distachyon	41.08	3.00e-124	438.00
IUUC-Gma-043090	Glycine max	58.42	0.00e+00	767.00
IUUC-Hvu-047204	Hordeum vulgare	41.20	4.00e-133	467.00
IUUC-Lpe-051010	Leersia perrieri	40.42	2.00e-100	358.00
IUUC-Mtr-058794	Medicago truncatula	59.70	0.00e+00	774.00
IUUC-Mac-064527	Musa acuminata	50.41	2.00e-89	322.00
IUUC-Obr-076695	Oryza brachyantha	41.95	6.00e-78	284.00
IUUC-Pop-099290	Populus trichocarpa	64.77	0.00e+00	878.00
IUUC-Ppe-102097	Prunus persica	63.03	0.00e+00	786.00
IUUC-Sit-110113	Setaria italica	41.92	4.00e-135	474.00
IUUC-Sly-111836	Solanum lycopersicum	59.44	0.00e+00	825.00
IUUC-Stu-112861	Solanum tuberosum	60.47	0.00e+00	835.00
IUUC-Sbi-114188	Sorghum bicolor	41.31	5.00e-129	454.00
IUUC-Tca-121206	Theobroma cacao	67.32	0.00e+00	882.00
IUUC-Tae-123313	Triticum aestivum	40.39	6.00e-129	454.00
IUUC-Tur-126514	Triticum urartu	39.89	3.00e-108	385.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence