iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016964

Ensembl Protein ID

Bra021142.1-P

UniProt Accession

M4DX96; M4DX96_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra021142	Bra021142.1	Bra021142.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-21	74.3	461	501
UBD/Beta-Prp	3.30e-51	175.3	416	667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgvllks 38
           H++ v++laf  ++  l +v+++ D+tikvW+  tg++l++
   Q: 461  HAGNVNDLAFsqPNqELcVVTCGEDKTIKVWSAVTGNKLHT 501
           99*********9665444799*************9999875 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
            ++ ++ v +spd+ ll +++  + + +++++ g+      ++  h + v+++ fs+  +    vt++eD+tikvw+  tg  +ht++ghe+ v+s
   Q: 416  YTAAVNRVIWSPDGGLLGVAYSKHIVHIYSYHGGDDlrnHLEIDAHAGNVNDLAFSQPNQelCVVTCGEDKTIKVWSAVTGNKLHTFEGHEAPVYS 511
           334445555666666666666666666666666665222223355666666666665544556666666666666666666666666666666666 PP
   S: 100  lsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvyslsfd 189
           +  ++  + +++ s+  d  i+ w  ++     + +++ + + + ++++ dg  l+s+++     +++  W+ + g + rt  g  ++sv  ++fd
   Q: 512  VCPHQkeNIQFIFSTAVDGRIKAWLYDNMGSRVDYDAPGR-SCTAMAYSADGTRLFSCGTskegESFIVEWNESEGAVKRTYLGLGKRSVGVVQFD 606
           6666654446666666666666665555444443444433.3344444555555555544111123444455566666666666666666666666 PP
   S: 190  sngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiri 248
             ++ ++ +++   vk+wd+ + e + t ++    ++  ++r  +++++l++ + ++ i+i
   Q: 607  TLKNKFLVAGDEFHVKFWDMDSVELLTTTTADGGLPSspCLRINKEGTLLAVSTTENGIKI 667
           6666666666666666666666666666665554444224555555555555556666655 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKDTVHRLEK ESGFFFNMRY FEDCISAGEW DDVEKYLSGF 60
TKADDNRYSM KIFFEIRKQK YLEALDKKDH AKAVEILAKE LKVFSTFNEE LFKEITMLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCTC TCAGCAGAGA ACTCGTCTTC TTGATTCTCC AGTTTCTCGA CGAGGAGAAG 60
TTCAAAGACA CTGTTCACAG GTCACTTTCA AAACCCAAAG GCTCAAACTT TTTTGTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006463	Arabidopsis lyrata	93.74	0.00e+00	2064.00
IUUC-Ath-007634	Arabidopsis thaliana	93.74	0.00e+00	2101.00
IUUC-Bol-015162	Brassica oleracea	94.58	0.00e+00	2153.00
IUUC-Gma-043971	Glycine max	74.32	0.00e+00	1699.00
IUUC-Mtr-058586	Medicago truncatula	73.88	0.00e+00	1701.00
IUUC-Pop-099918	Populus trichocarpa	73.37	0.00e+00	1678.00
IUUC-Ppe-101506	Prunus persica	73.92	0.00e+00	1694.00
IUUC-Sly-111451	Solanum lycopersicum	75.86	0.00e+00	1756.00
IUUC-Stu-112409	Solanum tuberosum	71.14	0.00e+00	1622.00
IUUC-Tca-121699	Theobroma cacao	73.78	0.00e+00	1721.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence