iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076921

Ensembl Protein ID

OB03G21140.1

UniProt Accession

J3LM38; J3LM38_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G21140	OB03G21140.1	OB03G21140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-20	71.0	456	491
UBD/Beta-Prp	8.40e-51	173.6	410	677

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtg 33
           H ++v+++af  ++  l +++++dD+tikvW+ ++g
   Q: 456  HVGGVNDIAFahPNkQLcIITCGDDKTIKVWEATSG 491
           99*********97653359************98876 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl...sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           +++  ++ + +spd++l+ +++ ++ ++++++  g+ +r+l     h ++v+++ f +  k   ++t+++D+tikvw+  +g    t++ghe+ v+s
   Q: 410  DPTVSVNRIIWSPDGTLFGVAYSRHIVQIYSYNGGDDIRQLleiDAHVGGVNDIAFAHPNKqlCIITCGDDKTIKVWEATSGAKQFTFEGHEAPVYS 506
           55666778899**************************8877433679999******99888899********************************* PP
   S: 100  lsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsG..slDrtvrl..Wdlktgkllrtltgghtdsvyslsfds 190
           +  +   + +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg+ l+s+  s+D+   l  W+ + g + rt +g  ++s   ++fd 
   Q: 507  VCPHYkeNIQFIFSTALDGKIKAWLYDNLGSRVDYDAP-GHWCTTMAYSADGSRLFSCgtSKDGESHLveWNESEGAVKRTYQGFRKRSMGVVQFDT 602
           855544388***************99998777756655.56999999***9*999998334566544333999************************ PP
   S: 191  ngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlql 262
           ++++++++++   +k+wd+ +++ + t  +    + s  vrf +++++l++ ++D+ i+i  + +   ll+tl++
   Q: 603  TRNRFLAAGDEFLIKIWDMDNTSLLTTIDADGGLPASprVRFNKEGTLLAVSTHDNGIKILaNADGVRLLRTLEN 677
           ****************************99998877633778899**************9656555555555555 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDEVINGNW DEVERYLGGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTGCGGTGC CGGGAGGGAG GTTGCTGCGA GGGGGTAGGA TAGGGTAGGG TTGGAGCAGA 60
AGGCGCATCC GCCGCTGGGT GGTGGGTGCG GCGTGGAGAG AGGATGTCGT CGCTGAGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

KEGG

obr:102712512

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	92.54	0.00e+00	2107.00
IUUC-Atr-002737	Amborella trichopoda	77.75	0.00e+00	1737.00
IUUC-Aly-005472	Arabidopsis lyrata	78.21	0.00e+00	1729.00
IUUC-Ath-007640	Arabidopsis thaliana	76.97	0.00e+00	1737.00
IUUC-Bdi-014914	Brachypodium distachyon	91.80	0.00e+00	2058.00
IUUC-Bol-015359	Brassica oleracea	77.39	0.00e+00	1729.00
IUUC-Bra-016893	Brassica rapa	77.21	0.00e+00	1727.00
IUUC-Gma-043911	Glycine max	80.95	0.00e+00	1826.00
IUUC-Hvu-047688	Hordeum vulgare	92.81	0.00e+00	1977.00
IUUC-Lpe-051514	Leersia perrieri	94.23	0.00e+00	2064.00
IUUC-Mtr-058037	Medicago truncatula	80.99	0.00e+00	1781.00
IUUC-Mac-065382	Musa acuminata	82.42	0.00e+00	1896.00
IUUC-Oba-075912	Oryza barthii	97.94	0.00e+00	2140.00
IUUC-Ogl-077334	Oryza glaberrima	97.97	0.00e+00	2168.00
IUUC-Ogu-078494	Oryza glumaepatula	97.97	0.00e+00	2168.00
IUUC-Oin-079720	Oryza indica	96.44	0.00e+00	2158.00
IUUC-Olo-081034	Oryza longistaminata	92.90	0.00e+00	2117.00
IUUC-Ome-081778	Oryza meridionalis	98.06	0.00e+00	2174.00
IUUC-Oni-082412	Oryza nivara	97.94	0.00e+00	2138.00
IUUC-Opu-083406	Oryza punctata	95.83	0.00e+00	2105.00
IUUC-Oru-084328	Oryza rufipogon	97.87	0.00e+00	2157.00
IUUC-Osa-085765	Oryza sativa	97.97	0.00e+00	2168.00
IUUC-Pop-098876	Populus trichocarpa	78.48	0.00e+00	1783.00
IUUC-Ppe-101370	Prunus persica	81.45	0.00e+00	1868.00
IUUC-Sit-110288	Setaria italica	92.68	0.00e+00	2065.00
IUUC-Sly-111739	Solanum lycopersicum	79.75	0.00e+00	1800.00
IUUC-Stu-112409	Solanum tuberosum	69.93	0.00e+00	1582.00
IUUC-Sbi-114078	Sorghum bicolor	92.06	0.00e+00	2055.00
IUUC-Tca-121628	Theobroma cacao	79.28	0.00e+00	1796.00
IUUC-Tae-125600	Triticum aestivum	93.30	0.00e+00	2113.00
IUUC-Tur-126412	Triticum urartu	91.18	0.00e+00	2093.00
IUUC-Vvi-131079	Vitis vinifera	79.97	0.00e+00	1803.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence