iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111483

Ensembl Protein ID

Solyc03g119650.2.1

UniProt Accession

K4BMB4; K4BMB4_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g119650.2	Solyc03g119650.2.1	Solyc03g119650.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-31	108.3	958	995
UBD/Beta-Prp	3.00e-52	178.4	853	1052

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH++ v+ ++  s+ +++++++Dgt+k+WD+rt++++ 
   Q: 958  GHNAQVSYVRMlSGERVLTAAHDGTVKMWDVRTDTCVA 995
           899******988889********************985 PP

UBD/Beta-Prp

   S: 44   l...lrslsgheaevtavkfspdgk............ilvtgseDrtikvwdls..tgkcvhtlkghedsvlslsfspsgdklvsGshd 115
           +   +r+l gh+++vta+ +  +++            ++++gs+D t+k+wd+s    +   tl+gh+++v+++s+++   k+vsGs+d
   Q: 853  MqtsIRTLRGHSGAVTAIHCVTKREvwdlvgdredagFFISGSTDCTVKIWDPSlrGAELRATLNGHTRTVRAISSDR--GKVVSGSDD 939
           1444999999999966665555555555555555568**************7666699********************..********* PP
   S: 116  rtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtv 204
             i vwd +t q le  l+gh++ v++v++ + g  + +++ D+tv++Wd++t++++ t      ++v ++++d++   l+++++d   
   Q: 940  HSILVWDKQTTQLLE-ELKGHNAQVSYVRMLS-GERVLTAAHDGTVKMWDVRTDTCVATVGR-CSGAVLCMEYDDSTGVLAAAGRDAVA 1025
           **************9.**************99.99*************************66.9************************* PP
   S: 205  klwdlqtgecvrtlnghtdnvksvrfs 231
           ++wd+++g+ +++l ght++++s+r+ 
   Q: 1026 NIWDVRAGRQMHKLMGHTKWIRSIRMV 1052
           ***********************9976 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MARIFEYFVV CGIGTEIRTL DGNRGYHGAG VMYMPALLDQ YPPSNHTLYP PPPPQLPTCV 60
LPAGVEFYGS GFDSNDPSTL PRSYPIVLTE GDGSKIYVSC IAFRDPVCED IAEAYCIPVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGTTGCTAG TCTGTAGTCT TGACCCAAAA TTCGAGTTGA ATTCGGTCTC GGGGGACGAG 60
GGTCAGGCCC AACAACAGCG AGAATTTTCT TGTTCAACTT CAATTCATAT GAATGCAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005112--dDENN_dom
IPR001194--DENN_dom
IPR020472--G-protein_beta_WD-40_rep
IPR005113--uDENN_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50947--DDENN
PS50211--DENN
PS50946--UDENN
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03455--dDENN
PF02141--DENN
PF03456--uDENN
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00801--dDENN
SM00799--DENN
SM00800--uDENN
SM00320--WD40

Gene Ontology

GO:0030136--C:clathrin-coated vesicle
GO:0005886--C:plasma membrane
GO:0010235--P:guard mother cell cytokinesis
GO:0009825--P:multidimensional cell growth
GO:0045824--P:negative regulation of innate immune response

KEGG

sly:101262196

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002593	Amborella trichopoda	77.75	0.00e+00	1846.00
IUUC-Aly-005508	Arabidopsis lyrata	73.21	0.00e+00	1750.00
IUUC-Ath-007614	Arabidopsis thaliana	73.05	0.00e+00	1791.00
IUUC-Bdi-014863	Brachypodium distachyon	74.26	0.00e+00	1791.00
IUUC-Bol-015997	Brassica oleracea	73.46	0.00e+00	1754.00
IUUC-Bra-017065	Brassica rapa	73.54	0.00e+00	1755.00
IUUC-Gma-042682	Glycine max	79.92	0.00e+00	1947.00
IUUC-Hvu-047377	Hordeum vulgare	81.01	5.00e-160	555.00
IUUC-Lpe-051109	Leersia perrieri	73.33	0.00e+00	1698.00
IUUC-Mtr-058651	Medicago truncatula	78.87	0.00e+00	1921.00
IUUC-Mac-065420	Musa acuminata	76.48	0.00e+00	1853.00
IUUC-Oba-075961	Oryza barthii	70.31	0.00e+00	1335.00
IUUC-Obr-076806	Oryza brachyantha	75.00	0.00e+00	1821.00
IUUC-Ogu-078716	Oryza glumaepatula	70.42	0.00e+00	1640.00
IUUC-Oin-079809	Oryza indica	61.63	0.00e+00	1357.00
IUUC-Olo-080386	Oryza longistaminata	70.43	0.00e+00	1712.00
IUUC-Ome-081107	Oryza meridionalis	72.39	0.00e+00	1723.00
IUUC-Oni-082213	Oryza nivara	68.37	0.00e+00	1589.00
IUUC-Opu-083850	Oryza punctata	69.20	0.00e+00	1569.00
IUUC-Oru-084982	Oryza rufipogon	73.02	0.00e+00	1666.00
IUUC-Osa-086141	Oryza sativa	74.86	0.00e+00	1782.00
IUUC-Olu-087744	Ostreococcus lucimarinus	34.86	7.00e-41	162.00
IUUC-Ppa-095259	Physcomitrella patens	54.66	0.00e+00	1312.00
IUUC-Pop-099233	Populus trichocarpa	80.33	0.00e+00	1939.00
IUUC-Ppe-101883	Prunus persica	78.57	0.00e+00	1551.00
IUUC-Smo-109566	Selaginella moellendorffii	58.11	0.00e+00	1417.00
IUUC-Sit-109736	Setaria italica	75.00	0.00e+00	1825.00
IUUC-Sbi-113820	Sorghum bicolor	75.00	0.00e+00	1827.00
IUUC-Tca-121657	Theobroma cacao	81.40	0.00e+00	1947.00
IUUC-Tae-124598	Triticum aestivum	72.96	0.00e+00	1807.00
IUUC-Tur-126080	Triticum urartu	71.05	0.00e+00	1144.00
IUUC-Vvi-131550	Vitis vinifera	83.47	0.00e+00	1983.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence