iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078314

Ensembl Protein ID

OGLUM01G32310.1

UniProt Accession

A0A0D9YDX5; A0A0D9YDX5_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM01G32310	OGLUM01G32310.1	OGLUM01G32310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-17	62.7	323	353

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H ++v+c+++  +d +++++Gs D+++++WD
   Q: 323  HGGDVHCVDWnlHDvNYILTGSADNSVRMWD 353
           99**********999**************** PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MLCSALAFGH KRGGISEREP RARVQSKRSS YDRESVTARG GSEAGAGDGG GGGRQRAAKG 60
ALEMKEKGSR AAVDERYAQW KSLIPVLYDW FANHNLVWPS LSCRWGPQFE KATYKNLVKP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCTGCT CTGCCCTTGC ATTCGGGCAC AAGAGGGGTG GCATCTCTGA GCGGGAGCCA 60
CGCGCAAGGG TCCAGAGCAA ACGCTCCTCA TACGACAGAG AGAGCGTGAC AGCGCGAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	74.61	8.00e-177	612.00
IUUC-Atr-003045	Amborella trichopoda	67.99	2.00e-161	561.00
IUUC-Aly-006131	Arabidopsis lyrata	64.10	8.00e-172	595.00
IUUC-Ath-007494	Arabidopsis thaliana	63.97	2.00e-172	597.00
IUUC-Bdi-014938	Brachypodium distachyon	79.35	0.00e+00	708.00
IUUC-Bol-015567	Brassica oleracea	65.05	4.00e-171	593.00
IUUC-Bra-017393	Brassica rapa	65.42	4.00e-171	593.00
IUUC-Gma-042982	Glycine max	67.03	2.00e-176	611.00
IUUC-Hvu-047149	Hordeum vulgare	90.14	4.00e-64	236.00
IUUC-Lpe-051595	Leersia perrieri	85.97	0.00e+00	697.00
IUUC-Mtr-057993	Medicago truncatula	67.25	7.00e-175	606.00
IUUC-Mac-065523	Musa acuminata	69.54	8.00e-145	506.00
IUUC-Oba-075959	Oryza barthii	93.61	0.00e+00	796.00
IUUC-Obr-076021	Oryza brachyantha	85.31	0.00e+00	758.00
IUUC-Ogl-077211	Oryza glaberrima	88.74	0.00e+00	785.00
IUUC-Oin-079269	Oryza indica	86.80	0.00e+00	759.00
IUUC-Olo-080631	Oryza longistaminata	76.25	0.00e+00	693.00
IUUC-Oni-082416	Oryza nivara	92.14	0.00e+00	852.00
IUUC-Opu-083571	Oryza punctata	77.69	0.00e+00	719.00
IUUC-Oru-084902	Oryza rufipogon	89.45	0.00e+00	821.00
IUUC-Osa-085579	Oryza sativa	86.80	0.00e+00	759.00
IUUC-Olu-087795	Ostreococcus lucimarinus	33.92	1.00e-60	226.00
IUUC-Ppa-095350	Physcomitrella patens	55.70	5.00e-139	486.00
IUUC-Pop-099959	Populus trichocarpa	65.34	2.00e-169	588.00
IUUC-Ppe-101724	Prunus persica	66.74	7.00e-170	589.00
IUUC-Sit-110597	Setaria italica	77.75	0.00e+00	649.00
IUUC-Sly-111411	Solanum lycopersicum	65.53	4.00e-165	573.00
IUUC-Stu-112285	Solanum tuberosum	62.32	5.00e-121	426.00
IUUC-Sbi-114341	Sorghum bicolor	77.75	0.00e+00	642.00
IUUC-Tca-121523	Theobroma cacao	66.74	4.00e-174	603.00
IUUC-Tae-125281	Triticum aestivum	79.07	0.00e+00	701.00
IUUC-Tur-126763	Triticum urartu	76.03	1.00e-178	619.00
IUUC-Vvi-131642	Vitis vinifera	67.17	1.00e-165	575.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence