iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112520

Ensembl Protein ID

PGSC0003DMT400015272

UniProt Accession

M1A5R7; M1A5R7_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG402005959	PGSC0003DMT400015272	PGSC0003DMT400015272

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-17	63.0	207	243

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtgvl 35
           H+d v +l++      ++l+s+s D+t+kvWD++t  +
   Q: 207  HKDAVLGLSWnkeyR-NILASASADHTVKVWDVTTEAC 243
           9*********96432.89***************99765 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MIAAISWVPK GVAKSVPAEA DPPTKEEIEQ ILKSGLFDKR EDSDDEEAEE DMNVDESEEN 60
EDDEVAIALA AADALGKATQ VSSAGTDDII DGLKELDMDN YDEEEEGIEL FGSGLKDLYY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATAGCAG CTATTTCATG GGTTCCCAAA GGGGTTGCAA AGTCTGTACC AGCTGAGGCT 60
GATCCACCTA CAAAGGAGGA AATTGAACAG ATTTTGAAGA GTGGTCTTTT TGATAAACGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002719	Amborella trichopoda	46.06	1.00e-73	268.00
IUUC-Bdi-014598	Brachypodium distachyon	43.33	1.00e-86	312.00
IUUC-Fox-037875	Fusarium oxysporum	52.56	6.00e-19	87.00
IUUC-Lpe-050918	Leersia perrieri	46.03	6.00e-86	310.00
IUUC-Mtr-058677	Medicago truncatula	45.83	6.00e-103	366.00
IUUC-Mac-064937	Musa acuminata	47.45	1.00e-89	322.00
IUUC-Obr-076759	Oryza brachyantha	46.44	1.00e-88	318.00
IUUC-Ogu-078324	Oryza glumaepatula	48.81	1.00e-78	285.00
IUUC-Ome-081585	Oryza meridionalis	46.84	7.00e-91	326.00
IUUC-Pop-099606	Populus trichocarpa	50.99	2.00e-108	384.00
IUUC-Ppe-101910	Prunus persica	52.22	3.00e-106	377.00
IUUC-Sit-110604	Setaria italica	44.58	5.00e-88	317.00
IUUC-Sly-111400	Solanum lycopersicum	80.70	6.00e-173	599.00
IUUC-Sbi-114069	Sorghum bicolor	45.79	1.00e-91	329.00
IUUC-Tca-121431	Theobroma cacao	48.83	9.00e-113	399.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence