iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099289

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_419106; POPTR_0008s12760g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s12760	POPTR_0008s12760.1	POPTR_0008s12760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-33	115.8	260	333

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p++flCpIslelMrdPv++++G+ty+rs+I++w++++++tcP+t+q+l++ +l+Pn++lr+li +wc e+++
   Q: 260  KIPHDFLCPISLELMRDPVIVATGQTYERSYIQRWIDTDNSTCPKTQQKLEHLTLTPNYVLRSLITQWCTEHKV 333
           58*********************************************************************987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAGGEDTLVT ATFLLDLVRQ ICSVGISVAG DKNKNDSVFR KDCMDLVRRV SLLTHFLEEI 60
NGQLGKLDAL GSSSSSSKEM NWWSDLVAAL QSAHNLVSLA GSFQSTNNSD GTAKKIVTLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC ATAACAGCAA CACAGCTTCG CCCGCGAAGC 60
TTTCTCTCTC TAAACTAAAC CAAACCAAAC CAAACTTCAA CTATGTTATG CTCTTGTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR008207--Sig_transdc_His_kin_Hpt_dom
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0008s12760g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000977	Aegilops tauschii	55.09	2.00e-159	555.00
IUUC-Mtr-058156	Medicago truncatula	66.10	0.00e+00	781.00
IUUC-Mac-065650	Musa acuminata	52.03	2.00e-159	555.00
IUUC-Sly-111534	Solanum lycopersicum	63.07	0.00e+00	750.00
IUUC-Stu-112138	Solanum tuberosum	64.13	0.00e+00	766.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence