iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d032293	Zm00001d032293_T002	Zm00001d032293_T002
Zm00001d032293	Zm00001d032293_T003	Zm00001d032293_T003
Zm00001d032293	Zm00001d032293_T001	Zm00001d032293_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-10	43.4	314	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d +++++Gs D t+++WD+r
   Q: 314  GHLDYSFASAWhPDgNIVATGSQDTTCRLWDIR 346
           799999999***999****************87 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MDEFELEDNL EFILQSIQEL MEDPGDNNAF GDANQNELFA SIVNYDQENM LPDVSAADVA 60
AGKDIQGIPW EKMLFGRDKY REMKMKNYRN YQNLSYARED ALQECKQVTK DSPYYDFHYN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGCGCTCCG CACCCAGGCG CAAGGGTGGT TTGGTTGGCC TCCGCCCCCG CGTCGCCTCG 60
TCTCTGGGCC TGCTCGCCTC ATTGCCCCCC GTGCTGCCTA CGCTTTTGCC AGCGCGCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

zma:100274157

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000214	Aegilops tauschii	83.21	3.00e-141	494.00
IUUC-Atr-002734	Amborella trichopoda	54.50	2.00e-146	511.00
IUUC-Bdi-014366	Brachypodium distachyon	84.91	0.00e+00	810.00
IUUC-Bol-015183	Brassica oleracea	52.00	5.00e-139	487.00
IUUC-Cme-027214	Cyanidioschyzon merolae	37.82	3.00e-53	203.00
IUUC-Gma-044288	Glycine max	55.11	2.00e-141	494.00
IUUC-Hvu-047437	Hordeum vulgare	81.16	3.00e-149	520.00
IUUC-Lpe-051685	Leersia perrieri	79.15	0.00e+00	712.00
IUUC-Mtr-058564	Medicago truncatula	55.14	3.00e-142	498.00
IUUC-Mac-065012	Musa acuminata	56.49	2.00e-136	479.00
IUUC-Oba-075469	Oryza barthii	82.94	0.00e+00	764.00
IUUC-Obr-076922	Oryza brachyantha	84.91	0.00e+00	786.00
IUUC-Ogu-077978	Oryza glumaepatula	82.94	0.00e+00	764.00
IUUC-Oin-079628	Oryza indica	68.86	9.00e-178	615.00
IUUC-Olo-080502	Oryza longistaminata	82.94	0.00e+00	763.00
IUUC-Oni-082262	Oryza nivara	82.48	0.00e+00	761.00
IUUC-Opu-083138	Oryza punctata	82.71	0.00e+00	760.00
IUUC-Oru-084351	Oryza rufipogon	82.94	0.00e+00	764.00
IUUC-Osa-085692	Oryza sativa	84.12	0.00e+00	770.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	32.70	4.00e-51	194.00
IUUC-Sit-110785	Setaria italica	95.27	0.00e+00	870.00
IUUC-Sly-111186	Solanum lycopersicum	56.01	5.00e-141	493.00
IUUC-Stu-111950	Solanum tuberosum	56.27	5.00e-143	500.00
IUUC-Sbi-114333	Sorghum bicolor	96.62	0.00e+00	891.00
IUUC-Tae-123077	Triticum aestivum	82.29	0.00e+00	804.00
IUUC-Tur-126142	Triticum urartu	82.29	8.00e-141	493.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence