iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108849

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377647

Gene Name

SELMODRAFT_126282

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_126282	EFJ11341	EFJ11341

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-26	90.9	170	206
UBD/Beta-Prp	8.20e-45	153.9	170	394

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           +Htd v++la+ d+ + s+s+D+t+kvW+l++ +++ 
   Q: 170  QHTDVVSALALGDGVVYSASWDKTVKVWRLSDLKCIE 206
           5**********669****************9999975 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlkghe.dsvls...... 99
           +h++v+++++   ++ ++ ++s+d+t+kvw++++ k+++s+  h+++v+a+  +    +l t+s D  ik+w  + s+ k   t+++h  ++vl       
   Q: 170  QHTDVVSALAL--GDGVVYSASWDKTVKVWRLSDLKCIESFVAHDDAVKALVAKAG--FLYTASADSKIKIWkrEASDKKSSKTYHRHLlARVLErpgncs 266
           69999**9999..***************************************9999..9*************87666777777777553144444677766 PP
   S: 100  .....lsfsp...sgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.......ktgkllrtltgghtds 182
                l++     ++++l  Gs+d+ i vw+l+ + +  +   +lsgh+++v c+++    +ll sGs+D+t+rlW+        ++   l   +g ht++
   Q: 267  savnaLALGGdggDDKVLYGGSSDSSISVWELNPDMEAVSlsgLLSGHTQAVACLATLR--DLLCSGSADKTIRLWRRerkqgysPSHISLSVVQG-HTGP 364
           664445555565555666679**************99999999**************99..9****************887776666666666799.**** PP
   S: 183  vyslsfdsng...kelvsgsldgtvklwdl 209
           v+s+ + +++    ++ sgsldg+ k+w +
   Q: 365  VKSIVLAPDRiglCSITSGSLDGQAKMWRV 394
           **********99999*************87 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MDLELVLQFD AVLLPSSDSD NAFSSTSRSS SNLSDSTSCS DNESLCSYRC LRSFNQESHA 60
VFSLGLVHDG GVICGGLGNN QISVWRHSDA THLLTLRSKL HAGAVKSLLV AGDKLFSAHQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTAG AATTAGTTCT CCAGTTCGAT GCCGTGCTTT TGCCTAGCAG CGATAGCGAT 60
AATGCCTTCT CCAGCACTAG TAGAAGCAGC AGCAACTTGT CCGACTCCAC CTCTTGCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_126282

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001063	Aegilops tauschii	33.98	5.00e-32	131.00
IUUC-Atr-002457	Amborella trichopoda	38.90	4.00e-61	228.00
IUUC-Bra-017125	Brassica rapa	38.57	1.00e-59	222.00
IUUC-Hvu-047445	Hordeum vulgare	37.16	3.00e-49	188.00
IUUC-Mtr-057793	Medicago truncatula	36.34	2.00e-55	209.00
IUUC-Ogl-076982	Oryza glaberrima	38.38	5.00e-45	174.00
IUUC-Ogu-078704	Oryza glumaepatula	38.38	5.00e-45	174.00
IUUC-Oin-079483	Oryza indica	38.10	3.00e-44	172.00
IUUC-Oni-082939	Oryza nivara	38.38	5.00e-45	174.00
IUUC-Opu-083126	Oryza punctata	38.48	9.00e-46	176.00
IUUC-Oru-084259	Oryza rufipogon	38.38	5.00e-45	174.00
IUUC-Osa-085894	Oryza sativa	38.38	6.00e-45	174.00
IUUC-Sit-110073	Setaria italica	37.57	1.00e-50	192.00
IUUC-Sly-111881	Solanum lycopersicum	40.21	1.00e-60	226.00
IUUC-Sbi-114287	Sorghum bicolor	37.06	5.00e-43	167.00
IUUC-Tae-124756	Triticum aestivum	40.45	6.00e-54	203.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence