iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095230

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544934

Gene Name

PHYPADRAFT_208212

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S45_24V6	PP1S45_24V6.1	PP1S45_24V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-08	33.3	283	315

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           H ++vt +a+   + ++v+G+ Dg++kvWD+r+
   Q: 283  HRGPVTTVAYdlAGVHMVTGGMDGQVKVWDVRK 315
           99********874489**************986 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MANQTNLAKG KRRSESLPGD NGDVVVLHRG EVKKRRGEKE ENKWKHIKDK KLRGQIVQRE 60
KLFGEAAETA TKVQQWLLPS EAGYLEAEDL EDTRHFSQEA IVKEVDVTSA RKAFDLQLPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGGAGTCGT GTAACTCCGG AGGGGTTTAG GGTTTAGGGT TTAGAGGACG ACGCCGAGGC 60
CCAATTGCAG GGAGAGAGAG GATCCATGGC GAGGTCGGGA CCCTCCCACT GATCGAACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ppp:PHYPADRAFT_208212

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000921	Aegilops tauschii	50.91	1.00e-139	489.00
IUUC-Atr-002528	Amborella trichopoda	55.37	4.00e-141	494.00
IUUC-Aly-005663	Arabidopsis lyrata	52.11	8.00e-128	449.00
IUUC-Ath-007405	Arabidopsis thaliana	52.11	2.00e-127	449.00
IUUC-Ang-009764	Aspergillus niger	48.05	4.00e-117	414.00
IUUC-Ame-011572	Astyanax mexicanus	45.57	4.00e-102	364.00
IUUC-Bdi-014459	Brachypodium distachyon	54.86	7.00e-138	483.00
IUUC-Bol-015169	Brassica oleracea	50.69	6.00e-126	444.00
IUUC-Bra-016837	Brassica rapa	50.46	1.00e-122	432.00
IUUC-Cel-018465	Caenorhabditis elegans	41.23	1.00e-94	340.00
IUUC-Cre-022704	Chlamydomonas reinhardtii	53.06	1.00e-155	542.00
IUUC-Cgl-026438	Colletotrichum gloeosporioides	48.28	8.00e-117	413.00
IUUC-Cne-026784	Cryptococcus neoformans	43.69	1.00e-89	323.00
IUUC-Dre-028533	Danio rerio	46.31	9.00e-100	356.00
IUUC-Dse-031280	Dothistroma septosporum	44.23	8.00e-113	400.00
IUUC-Eeu-034982	Erinaceus europaeus	46.47	4.00e-59	221.00
IUUC-Fox-037980	Fusarium oxysporum	45.09	6.00e-114	404.00
IUUC-Fso-038154	Fusarium solani	50.00	3.00e-118	417.00
IUUC-Gmo-039548	Gadus morhua	48.26	5.00e-101	360.00
IUUC-Ggr-039976	Gaeumannomyces graminis	43.96	2.00e-113	401.00
IUUC-Gac-042249	Gasterosteus aculeatus	46.43	9.00e-107	379.00
IUUC-Gma-042693	Glycine max	49.90	2.00e-135	475.00
IUUC-Hvu-047436	Hordeum vulgare	54.86	3.00e-95	341.00
IUUC-Kpa-049329	Komagataella pastoris	47.31	2.00e-109	389.00
IUUC-Lpe-051501	Leersia perrieri	56.47	7.00e-127	449.00
IUUC-Loc-051736	Lepisosteus oculatus	47.61	2.00e-100	359.00
IUUC-Meu-056419	Macropus eugenii	48.19	4.00e-92	331.00
IUUC-Mor-057146	Magnaporthe oryzae	44.86	3.00e-111	394.00
IUUC-Mpo-057512	Magnaporthe poae	49.40	2.00e-116	411.00
IUUC-Mtr-058139	Medicago truncatula	52.51	8.00e-140	489.00
IUUC-Mla-059028	Melampsora laricipopulina	45.30	6.00e-95	340.00
IUUC-Mvi-060533	Microbotryum violaceum	47.47	1.00e-103	369.00
IUUC-Mac-065643	Musa acuminata	56.64	8.00e-139	486.00
IUUC-Ont-071977	Oreochromis niloticus	46.50	6.00e-104	370.00
IUUC-Oba-075525	Oryza barthii	54.34	1.00e-135	476.00
IUUC-Obr-076468	Oryza brachyantha	55.72	7.00e-138	483.00
IUUC-Ogl-077395	Oryza glaberrima	54.34	1.00e-135	476.00
IUUC-Ogu-078730	Oryza glumaepatula	54.09	7.00e-135	473.00
IUUC-Oin-079797	Oryza indica	54.34	1.00e-135	475.00
IUUC-Olo-080539	Oryza longistaminata	54.09	5.00e-135	473.00
IUUC-Oni-082635	Oryza nivara	54.34	2.00e-135	475.00
IUUC-Opu-083733	Oryza punctata	54.84	3.00e-137	481.00
IUUC-Oru-084560	Oryza rufipogon	54.34	1.00e-135	475.00
IUUC-Osa-085463	Oryza sativa	54.34	1.00e-135	476.00
IUUC-Ola-086667	Oryzias latipes	46.81	8.00e-112	396.00
IUUC-Olu-087881	Ostreococcus lucimarinus	50.73	4.00e-136	477.00
IUUC-Pma-094742	Petromyzon marinus	45.11	8.00e-94	336.00
IUUC-Pop-099756	Populus trichocarpa	52.62	9.00e-132	462.00
IUUC-Ppe-101354	Prunus persica	53.62	1.00e-133	469.00
IUUC-Pte-104146	Pyrenophora teres	42.48	2.00e-103	369.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	46.53	1.00e-103	369.00
IUUC-Sce-106227	Saccharomyces cerevisiae	43.85	6.00e-110	390.00
IUUC-Sja-107925	Schizosaccharomyces japonicus	49.51	5.00e-124	437.00
IUUC-Spo-108359	Schizosaccharomyces pombe	49.00	7.00e-118	416.00
IUUC-Smo-108706	Selaginella moellendorffii	61.86	1.00e-157	549.00
IUUC-Sit-110158	Setaria italica	50.71	8.00e-129	452.00
IUUC-Sly-111569	Solanum lycopersicum	53.21	3.00e-127	447.00
IUUC-Stu-112403	Solanum tuberosum	53.20	4.00e-127	447.00
IUUC-Sbi-113839	Sorghum bicolor	54.31	4.00e-125	440.00
IUUC-Sre-115150	Sporisorium reilianum	47.61	9.00e-109	386.00
IUUC-Tru-118535	Takifugu rubripes	46.43	3.00e-110	391.00
IUUC-Tca-121165	Theobroma cacao	47.48	6.00e-130	457.00
IUUC-Tre-122114	Trichoderma reesei	51.58	3.00e-120	424.00
IUUC-Tvi-122437	Trichoderma virens	49.88	4.00e-117	414.00
IUUC-Tae-125874	Triticum aestivum	50.91	1.00e-139	489.00
IUUC-Tur-126307	Triticum urartu	48.25	1.00e-132	465.00
IUUC-Tme-127208	Tuber melanosporum	50.48	4.00e-127	447.00
IUUC-Ttr-129047	Tursiops truncatus	47.75	6.00e-105	374.00
IUUC-Uma-129320	Ustilago maydis	47.61	3.00e-109	388.00
IUUC-Vda-129926	Verticillium dahliae	41.76	3.00e-111	394.00
IUUC-Vvi-131643	Vitis vinifera	51.03	3.00e-131	461.00
IUUC-Yli-134674	Yarrowia lipolytica	44.87	1.00e-108	386.00
IUUC-Zma-135903	Zea mays	54.36	1.00e-121	429.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence