iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076391

Ensembl Protein ID

OB02G38040.1

UniProt Accession

J3LGN7; J3LGN7_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB02G38040	OB02G38040.1	OB02G38040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-20	74.1	170	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           +++++ Cp+ +e+M+dPv ++sG+ty+r++Ie+++++         cPvt+ pl++++l+ n +l+++i +w  +n+
   Q: 170  LYDALFCPLANEVMTDPVLTESGVTYERRAIEEYFNRFAGnsktvICPVTKMPLQNRTLMSNSSLKSVIAEWKMRNE 246
           578999*****************************54443346789**************************98875 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MLLVVSTDVN QQSFNDSGTV TIKRQTAQRA PSSVTQMPES PPACVNLAKD LTARCRARAL 60
QLTDDEILSI TQDLDSVIQN LCDYISKIPS SALGSNAYTG VAVKALSARG FLEDDMLTNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGTTGG TGGTCAGTAC TGATGTCAAT CAGCAGAGTT TCAATGACTC AGGCACAGTC 60
ACAATAAAGC GTCAAACAGC ACAAAGGGCC CCAAGCAGTG TGACACAGAT GCCAGAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

obr:102706534

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000318	Aegilops tauschii	69.04	0.00e+00	1303.00
IUUC-Atr-002664	Amborella trichopoda	39.64	4.00e-178	617.00
IUUC-Aly-006424	Arabidopsis lyrata	43.97	0.00e+00	650.00
IUUC-Ath-006596	Arabidopsis thaliana	43.02	2.00e-172	598.00
IUUC-Bdi-014418	Brachypodium distachyon	73.58	0.00e+00	1328.00
IUUC-Bol-016179	Brassica oleracea	43.19	2.00e-178	618.00
IUUC-Bra-017617	Brassica rapa	43.25	4.00e-176	611.00
IUUC-Hvu-047634	Hordeum vulgare	73.07	0.00e+00	1325.00
IUUC-Lpe-051636	Leersia perrieri	86.30	0.00e+00	1509.00
IUUC-Mac-065538	Musa acuminata	44.49	0.00e+00	692.00
IUUC-Oba-075656	Oryza barthii	88.19	0.00e+00	1654.00
IUUC-Ogl-077675	Oryza glaberrima	88.19	0.00e+00	1654.00
IUUC-Ogu-078313	Oryza glumaepatula	88.40	0.00e+00	1656.00
IUUC-Oin-079739	Oryza indica	88.30	0.00e+00	1666.00
IUUC-Olo-080998	Oryza longistaminata	88.09	0.00e+00	1693.00
IUUC-Ome-082000	Oryza meridionalis	88.39	0.00e+00	1659.00
IUUC-Oni-082054	Oryza nivara	82.42	0.00e+00	1607.00
IUUC-Opu-083582	Oryza punctata	87.56	0.00e+00	1647.00
IUUC-Oru-084523	Oryza rufipogon	88.09	0.00e+00	1612.00
IUUC-Osa-086199	Oryza sativa	88.09	0.00e+00	1612.00
IUUC-Pop-099505	Populus trichocarpa	40.02	0.00e+00	652.00
IUUC-Ppe-101776	Prunus persica	41.87	0.00e+00	682.00
IUUC-Sit-110498	Setaria italica	71.93	0.00e+00	1269.00
IUUC-Sly-111047	Solanum lycopersicum	40.10	0.00e+00	687.00
IUUC-Stu-112113	Solanum tuberosum	39.88	0.00e+00	676.00
IUUC-Sbi-114808	Sorghum bicolor	72.19	0.00e+00	1337.00
IUUC-Tca-121365	Theobroma cacao	42.12	0.00e+00	718.00
IUUC-Vvi-131502	Vitis vinifera	45.31	0.00e+00	649.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence