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Tag Content
iUUCD ID IUUC-Bra-017464
Ensembl Protein ID Bra010967.1-P
UniProt Accession M4D3B3; M4D3B3_BRARP
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra010967 Bra010967.1 Bra010967.1-P
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.20e-29 101.2 198 231
UBD/Beta-Prp 6.10e-40 138.2 198 410
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvl 35
    H+d vt+la +++++ s s+D+t+k+W+ ++ ++
   Q: 198 HADAVTALAVNNGFIYSVSWDKTLKIWRASDLRC 231
    99********66***************9777666 PP
   


   UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw....dlstgkcvhtlkghedsvlsl 100
    h + +t++++ ++ ++ + s+d+t+k+w++++ + +s++ h+++v+av s +g + tgs Dr i+vw d + +k v tl++h++ v +l
   Q: 198 HADAVTALAV--NNGFIYSVSWDKTLKIWRASDLRCQESIKAHDDAVNAVAVSTNG-TVYTGSADRRIRVWakpaDSKRYKLVATLEKHKSAVNAL 290
    7778899999..9999***************************************9.9************************************** PP
   S: 101 sfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg...kllrtltgghtdsvyslsfds 190
    +++++g++l sGs dr i vw+ e + + + l+ghd+++ ++ + +ll sGs+Drt r+W+ t+ ++l+ l+g ht++v+sl+ +
   Q: 291 ALNEDGSVLFSGSCDRSILVWEREDSSSYMAvsgALRGHDKAILSLFNVS--DLLLSGSADRTARIWRRGTDgcySCLEVLSG-HTKPVKSLAAVK 383
    **********************999999999999*********9999988..9****************66622256667787.*********877 PP
   S: 191 ng.....kelvsgsldgtvklwdlqtg 212
    ++ ++vsgsldg vk w ++ +
   Q: 384 DSeldgvVSIVSGSLDGEVKCWKVSVT 410
    7778999***************99844 PP
   

Organism Brassica rapa
Protein Sequence
(Fasta)
MRVISWLFDS EHSSRRRRTP KSPTHLDSTD SATSSSLSEA TGSTSLHSSL SLQTLPSVPS 60
LQKIPAETLA VTVSHSVTSS FKLRERSLPV TCLAVNGGYV FAVSGHEVSI YDRAMCAHLD 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Bra-017464|E3,WD_repeat;UBD,Beta-Prp|Brassica rapa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGCGGGTTA TCTCATGGCT GTTCGATTCA GAACATTCTT CCCGGAGAAG ACGAACACCA 60
AAATCTCCAA CGCATTTGGA TTCCACCGAC AGCGCCACGT CATCTTCGCT CAGCGAAGCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Bra-017464|E3,WD_repeat;UBD,Beta-Prp|Brassica rapa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002783 Amborella trichopoda 53.02 2.00e-100 358.00
IUUC-Aly-006280 Arabidopsis lyrata 84.16 0.00e+00 672.00
IUUC-Ath-006951 Arabidopsis thaliana 83.92 0.00e+00 664.00
IUUC-Bol-015247 Brassica oleracea 97.16 0.00e+00 749.00
IUUC-Gma-043162 Glycine max 63.61 1.00e-124 440.00
IUUC-Ogl-077746 Oryza glaberrima 45.17 4.00e-44 172.00
IUUC-Ogu-078557 Oryza glumaepatula 45.17 6.00e-44 171.00
IUUC-Oin-079061 Oryza indica 45.17 5.00e-44 171.00
IUUC-Oni-083112 Oryza nivara 45.17 4.00e-44 172.00
IUUC-Oru-084254 Oryza rufipogon 45.17 5.00e-44 171.00
IUUC-Osa-086021 Oryza sativa 45.17 2.00e-44 172.00
IUUC-Pop-100092 Populus trichocarpa 68.36 8.00e-136 476.00
IUUC-Smo-108947 Selaginella moellendorffii 43.00 4.00e-49 188.00
IUUC-Sly-111566 Solanum lycopersicum 58.40 5.00e-114 404.00
IUUC-Stu-112893 Solanum tuberosum 57.18 2.00e-111 395.00
IUUC-Sbi-114374 Sorghum bicolor 51.87 2.00e-53 203.00
IUUC-Tca-121847 Theobroma cacao 68.68 3.00e-133 468.00
IUUC-Vvi-130905 Vitis vinifera 62.86 1.00e-127 449.00
Created Date 25-Jun-2017

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