iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111681

Ensembl Protein ID

Solyc05g014460.1.1

UniProt Accession

K4BYG5; K4BYG5_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc05g014460.1	Solyc05g014460.1.1	Solyc05g014460.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.70e-33	111.7	348	383
UBD/Beta-Prp	1.00e-47	163.5	93	288

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           ++v+++af ++  +l+sGs D+ + +W++++ +l++
   Q: 348  EPVYSIAFsPNsEYLASGSVDKCMNIWSVKEAKLVR 383
           58*******777*****************9988876 PP

UBD/Beta-Prp

   S: 79   wdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee............tlsghdgvvncvvvhpdgnllvsGsl 157
           w  st+k  + ++gh+++v ++++sp+++ l+sGs   t+r+w +  g   ++              +++++ v+++ ++ +g ll+ G++
   Q: 93   WTNSTRKKSVNMEGHTSEVFACAWSPERSLLASGSGYATARIWYIGDGPFNSTipnvlvlnhldsQATEENKDVTSLDWNREGTLLAIGFY 183
           7889999**************************************99998888999******9998999999******************* PP
   S: 158  DrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           D++ r+W+  +g+l+ tl + h++ + sl+++++g++l+sgs d+t  +w++++ge  +++  h+ + ++v+  +nd +  s++ D +i++
   Q: 184  DGQARIWKR-SGELVSTLNK-HKGTIMSLKWNEKGNYLLSGSIDTTAVIWNVKSGESKQQFGFHSGQLLDVAWRNNDSFATSCA-DSVIYV 271
           *******65.********99.***********************************9999999***********8888888886.****** PP
   S: 249  Wdlrsgdllktlqlhns 265
             +  ++++k++++h++
   Q: 272  CKVGDNKPVKKFSGHQD 288
           *999**********996 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASLTSEFLN FIVFRYLFES GFTHAAFTFG YEDNTDMNED FKPLEPMDLI TKSVDELRKI 60
IKDKNEKAQK RNLGGKVRRM LTTNENPQEE QRWTNSTRKK SVNMEGHTSE VFACAWSPER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCTT TAACCTCTGA GTTCCTCAAT TTCATTGTTT TCCGCTATCT CTTTGAATCA 60
GGCAATTTAA TTCTCATCTT CAGAATTTGT TATATCTATC CAATTTTAAT TGATCTTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000118--C:histone deacetylase complex
GO:0003714--F:transcription corepressor activity
GO:0016575--P:histone deacetylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence