iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099074

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transcriptional regulator STERILE APETALA family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_775149; POPTR_0014s16440g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s16440	POPTR_0014s16440.1	POPTR_0014s16440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-08	35.2	76	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclafsdtllvsGsdDgtikvWDlrt 32
           +clafsd++l++G  Dg ++++Dl+t
   Q: 76   RCLAFSDRYLACGFADGAVRLFDLTT 101
           89***99*****************98 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

VCSTWRAVSR SDPLWHRLTR GIWGRTNLFH DTWREEYIYR HQTAQNFRSG RAVHFALHFD 60
PADVDDPNDP DALICRCLAF SDRYLACGFA DGAVRLFDLT TRLHARTFRP EHHDRLGRFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTGTTCAA CGTGGCGAGC AGTCTCGCGT TCGGATCCTC TTTGGCACCG TCTCACTCGC 60
GGTATCTGGG GCCGCACCAA CCTTTTCCAT GACACTTGGC GAGAGGAGTA TATCTACCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1

Gene Ontology

GO:0005634--C:nucleus
GO:0009908--P:flower development
GO:0009554--P:megasporogenesis
GO:0046622--P:positive regulation of organ growth
GO:0030163--P:protein catabolic process

KEGG

pop:POPTR_0014s16440g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Sly-110966	Solanum lycopersicum	58.61	8.00e-123	433.00
IUUC-Stu-112769	Solanum tuberosum	57.94	1.00e-117	416.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence