iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099381

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_646576; POPTR_0003s12350g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s12350	POPTR_0003s12350.1	POPTR_0003s12350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.90e-08	34.0	342	383

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ ++dg  ++ lpCgH+fh +C+ kw       + +++CPlC+
   Q: 342  CCICLSAYEDGaeLRQLPCGHHFHCTCVDKW------LYINATCPLCK 383
           ********77766999***************......**********7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSTTTPIST ATTTTPTRTG SSDDIIDTTP FLSPGQQNEP NPNSSRRSIR RQSLRDAARF 60
LRRASSRRMM REPSMLVRET AAEQLEERQS DWAYSKPVVI LDIIWNFAFV AVAAGVLVLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAATCCATT TTCCATTTCT GTTACAGAAC ATTAATCTCT CCAAAATTCT TTCGTCCCCG 60
CAAAGAACCA ACTACAACCC AAAAAACAAT CTCTCAATAA GAGAACGAAA CAACCTCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0003s12350g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000315	Aegilops tauschii	63.60	7.00e-81	292.00
IUUC-Atr-002539	Amborella trichopoda	64.05	1.00e-99	355.00
IUUC-Aly-006096	Arabidopsis lyrata	73.57	2.00e-114	404.00
IUUC-Ath-007048	Arabidopsis thaliana	72.65	5.00e-117	413.00
IUUC-Bdi-014813	Brachypodium distachyon	65.14	1.00e-96	346.00
IUUC-Bol-015185	Brassica oleracea	69.36	3.00e-103	367.00
IUUC-Bra-018052	Brassica rapa	67.77	3.00e-113	401.00
IUUC-Gma-043207	Glycine max	72.68	4.00e-114	404.00
IUUC-Hvu-047150	Hordeum vulgare	63.02	1.00e-105	375.00
IUUC-Lpe-051532	Leersia perrieri	66.37	1.00e-98	352.00
IUUC-Mtr-058719	Medicago truncatula	68.25	1.00e-109	389.00
IUUC-Mac-064494	Musa acuminata	68.04	2.00e-105	375.00
IUUC-Oba-075346	Oryza barthii	64.91	1.00e-103	369.00
IUUC-Obr-076817	Oryza brachyantha	62.87	1.00e-79	288.00
IUUC-Ogl-077385	Oryza glaberrima	64.91	1.00e-103	369.00
IUUC-Ogu-078850	Oryza glumaepatula	64.91	2.00e-103	369.00
IUUC-Oin-079121	Oryza indica	67.08	2.00e-96	345.00
IUUC-Olo-080611	Oryza longistaminata	64.12	7.00e-83	302.00
IUUC-Ome-081898	Oryza meridionalis	65.20	1.00e-95	342.00
IUUC-Oni-082330	Oryza nivara	64.91	1.00e-103	369.00
IUUC-Opu-083495	Oryza punctata	65.50	2.00e-97	348.00
IUUC-Oru-084814	Oryza rufipogon	64.62	1.00e-103	369.00
IUUC-Osa-085284	Oryza sativa	64.62	1.00e-103	369.00
IUUC-Ppa-095398	Physcomitrella patens	60.69	7.00e-90	323.00
IUUC-Ppe-102030	Prunus persica	75.07	8.00e-119	419.00
IUUC-Pgr-103393	Puccinia graminis	37.31	2.00e-08	52.40
IUUC-Sha-106516	Sarcophilus harrisii	41.46	1.00e-14	74.30
IUUC-Smo-108796	Selaginella moellendorffii	62.50	3.00e-96	344.00
IUUC-Sit-110740	Setaria italica	66.96	3.00e-97	347.00
IUUC-Sly-111350	Solanum lycopersicum	64.63	2.00e-94	338.00
IUUC-Stu-112030	Solanum tuberosum	65.69	6.00e-103	366.00
IUUC-Sbi-114737	Sorghum bicolor	66.67	2.00e-102	364.00
IUUC-Tca-121775	Theobroma cacao	77.21	3.00e-124	437.00
IUUC-Tae-124948	Triticum aestivum	66.06	2.00e-107	381.00
IUUC-Tur-126321	Triticum urartu	65.23	8.00e-107	380.00
IUUC-Vvi-131280	Vitis vinifera	77.40	3.00e-118	417.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence