iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111915

Ensembl Protein ID

Solyc05g053040.2.1

UniProt Accession

K4C1Y4; K4C1Y4_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc05g053040.2	Solyc05g053040.2.1	Solyc05g053040.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-08	34.7	214	255

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle  +dg   ++lpC H+fha+C+  w       +++ +CP+C+
   Q: 214  CSVCLEQVSDGelIRSLPCLHQFHANCIDPW------LRQRGTCPVCK 255
           ********88888999***************......**********7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSFVFRGARA DIEPGFPGLI PERRAVRVHA GRPVNTNSLA FLVTVLLLFM ILNSHQMSPN 60
FLLWLVLGVF FMATTLRMYA TCQQLQAQAQ AHAVAASGGL LGPTELRLHM PPSIALATRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTTTG TTTTCCGAGG CGCTAGAGCA GATATAGAAC CTGGTTTTCC AGGATTGATC 60
CCTGAGCGCC GTGCAGTGGT AGTCTCCTAC ATCTCCTTCT AGTGATTGTT ACGTTTGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0043231--C:intracellular membrane-bounded organelle
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0009789--P:positive regulation of abscisic acid-activated signaling pathway
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0009737--P:response to abscisic acid
GO:0009651--P:response to salt stress
GO:0009414--P:response to water deprivation

KEGG

sly:101247325

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000396	Aegilops tauschii	50.79	2.00e-62	231.00
IUUC-Atr-002651	Amborella trichopoda	74.90	5.00e-82	296.00
IUUC-Aly-006305	Arabidopsis lyrata	75.00	1.00e-96	345.00
IUUC-Ath-007026	Arabidopsis thaliana	74.01	1.00e-94	338.00
IUUC-Bdi-015038	Brachypodium distachyon	64.86	1.00e-73	268.00
IUUC-Bol-015365	Brassica oleracea	74.34	1.00e-89	322.00
IUUC-Bra-017904	Brassica rapa	75.85	4.00e-91	327.00
IUUC-Cja-018949	Callithrix jacchus	46.55	1.00e-11	62.00
IUUC-Cre-022982	Chlamydomonas reinhardtii	63.83	3.00e-15	75.50
IUUC-Csa-023712	Chlorocebus sabaeus	54.55	9.00e-13	67.80
IUUC-Csv-025869	Ciona savignyi	47.37	3.00e-13	69.30
IUUC-Cme-027166	Cyanidioschyzon merolae	30.39	2.00e-14	71.60
IUUC-Gma-044260	Glycine max	82.64	7.00e-100	355.00
IUUC-Ggo-045644	Gorilla gorilla	54.55	9.00e-13	68.20
IUUC-Hsa-045983	Homo sapiens	54.55	8.00e-13	68.60
IUUC-Hvu-047764	Hordeum vulgare	67.02	4.00e-66	243.00
IUUC-Lpe-051371	Leersia perrieri	66.67	4.00e-71	260.00
IUUC-Mcc-054760	Macaca mulatta	54.55	7.00e-13	68.60
IUUC-Mtr-058078	Medicago truncatula	80.80	2.00e-100	358.00
IUUC-Mac-065081	Musa acuminata	71.02	1.00e-82	298.00
IUUC-Nle-069493	Nomascus leucogenys	54.55	6.00e-13	68.90
IUUC-Oba-075903	Oryza barthii	60.44	2.00e-25	107.00
IUUC-Obr-076184	Oryza brachyantha	59.87	6.00e-62	230.00
IUUC-Ogl-076965	Oryza glaberrima	65.73	3.00e-69	254.00
IUUC-Ogu-078414	Oryza glumaepatula	58.25	3.00e-55	207.00
IUUC-Oin-079430	Oryza indica	65.73	4.00e-69	253.00
IUUC-Olo-080739	Oryza longistaminata	65.73	5.00e-69	253.00
IUUC-Ome-081538	Oryza meridionalis	65.73	2.00e-69	254.00
IUUC-Oni-082633	Oryza nivara	65.73	2.00e-69	254.00
IUUC-Opu-084125	Oryza punctata	67.83	3.00e-71	260.00
IUUC-Oru-085061	Oryza rufipogon	58.25	3.00e-55	207.00
IUUC-Osa-086209	Oryza sativa	65.73	4.00e-69	253.00
IUUC-Ptr-090726	Pan troglodytes	54.55	8.00e-13	68.60
IUUC-Pan-091958	Papio anubis	54.55	6.00e-13	68.90
IUUC-Ppa-095613	Physcomitrella patens	57.56	1.00e-55	208.00
IUUC-Pab-097950	Pongo abelii	54.55	3.00e-13	69.30
IUUC-Pop-099911	Populus trichocarpa	81.59	4.00e-94	336.00
IUUC-Ppe-101792	Prunus persica	81.59	2.00e-104	371.00
IUUC-Smo-108870	Selaginella moellendorffii	55.34	2.00e-65	241.00
IUUC-Sit-110587	Setaria italica	81.25	4.00e-16	75.50
IUUC-Stu-112568	Solanum tuberosum	81.75	3.00e-105	375.00
IUUC-Sar-113693	Sorex araneus	53.49	4.00e-12	65.90
IUUC-Sbi-113958	Sorghum bicolor	67.13	1.00e-75	275.00
IUUC-Tca-121397	Theobroma cacao	76.17	3.00e-101	360.00
IUUC-Tae-125370	Triticum aestivum	66.43	3.00e-66	244.00
IUUC-Tur-125977	Triticum urartu	59.72	4.00e-65	240.00
IUUC-Vvi-131326	Vitis vinifera	84.06	2.00e-98	351.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence