iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Osa-086241

UUCD1 version

UUC-OrS-00401

Ensembl Protein ID

OS04T0437300-01

UniProt Accession

Q7XV59; Q7XV59_ORYSJ

Genbank Protein ID

BAF14771.1; BAS89315.1; CAD40819.2

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

AP008210; AP014960; AL606592

Gene Name

Os04g0437300; Os04g0437300; OSJNBa0006B20.11; OSNPB_040437300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS04G0437300	OS04T0437300-01	OS04T0437300-01

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	24486490

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	2.50e-31	108.5	3	75
E3 activity/RING/RING	0.001	20.5	9	46

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceens 73
           +p+ f+CpIsl++++dPv+l++G+tydr +Ie+wla g++tcPvt+qpl + + lvPn tlr+li++w+++ +
   Q: 3    IPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLgDATALVPNRTLRHLIERWLSTDQ 75
           899**********************************************889999**************9976 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPl 44
           C+i l+ f d p++l  g ++ + C+++w     ++ ++ +CP+
   Q: 9    CPISLDIFTD-PVTLCTGQTYDRPCIERW-----LAAGHRTCPV 46
           **********.9978779***********.....8********7 PP

Organism

Oryza sativa

Protein Sequence
(Fasta)

MSIPHLFRCP ISLDIFTDPV TLCTGQTYDR PCIERWLAAG HRTCPVTMQP LGDATALVPN 60
RTLRHLIERW LSTDQHHNHH LPEPAAPAAE AEADAEEPSL AALKRCLQQP DAAGAGKAKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCTTCTCT CTCTCTCTAT CTCTAGCATT CTCTCTCTGA TCTTGAGATA ATCGGATGCA 60
AGTGCAACTC CTGTTGTGTG TTCTTGGTCA TCGTCTTCAT CGAGTACAAA CCCACATGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

osa:4335911

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002561	Amborella trichopoda	35.17	9.00e-46	176.00
IUUC-Bdi-014442	Brachypodium distachyon	59.70	3.00e-91	327.00
IUUC-Gma-043244	Glycine max	35.38	4.00e-57	214.00
IUUC-Hvu-047433	Hordeum vulgare	71.78	1.00e-56	210.00
IUUC-Lpe-051453	Leersia perrieri	72.08	3.00e-76	277.00
IUUC-Mtr-058668	Medicago truncatula	36.15	3.00e-52	198.00
IUUC-Mac-064799	Musa acuminata	47.37	9.00e-64	236.00
IUUC-Oba-075982	Oryza barthii	100.00	3.00e-44	169.00
IUUC-Ogl-077204	Oryza glaberrima	99.02	6.00e-123	432.00
IUUC-Ogu-078726	Oryza glumaepatula	97.80	5.00e-127	446.00
IUUC-Oin-079338	Oryza indica	100.00	2.00e-92	332.00
IUUC-Ome-081303	Oryza meridionalis	91.95	8.00e-136	475.00
IUUC-Oni-082692	Oryza nivara	98.78	5.00e-131	459.00
IUUC-Opu-083613	Oryza punctata	84.84	1.00e-136	478.00
IUUC-Oru-084341	Oryza rufipogon	98.78	5.00e-130	456.00
IUUC-Pop-099942	Populus trichocarpa	38.35	3.00e-56	211.00
IUUC-Ppe-101486	Prunus persica	39.50	2.00e-53	202.00
IUUC-Sit-110225	Setaria italica	71.19	5.00e-85	306.00
IUUC-Sly-111154	Solanum lycopersicum	37.00	4.00e-64	237.00
IUUC-Stu-112583	Solanum tuberosum	37.47	6.00e-65	239.00
IUUC-Sbi-114119	Sorghum bicolor	70.53	4.00e-96	343.00
IUUC-Tca-121526	Theobroma cacao	35.44	1.00e-43	169.00
IUUC-Tae-122999	Triticum aestivum	69.39	5.00e-107	379.00
IUUC-Tur-126273	Triticum urartu	69.12	3.00e-22	98.20
IUUC-Vvi-131284	Vitis vinifera	42.59	2.00e-63	235.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence