iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggo-044988

Ensembl Protein ID

ENSGGOP00000000347.3

UniProt Accession

G3QDM4; G3QDM4_GORGO

Protein Name

Uncharacterized protein

Gene Name

LDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000000354.3	ENSGGOT00000000356.3	ENSGGOP00000000347.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	63.34	2.00e-124	442.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MSSTPHDPFY SSPFGPFYRR HTPYMVQPEY RIYEMNKRLQ SRTEDSDNLW WDAFATEFFE 60
DDATLTLSFC LEDGPKRYTI GRTLIPRYFS TVFEGGVTDL YYILKHSKES YHNSSITVDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTTCTTCC CTCCCTTCCT CCATACCAAC CTCCCTCCCT CTCTGGAGCT CCTGCTCTCT 60
CCCTCTCCCT CCTCTCCCGT GCTCCCTCCC TCCCTCCCTC TTTCCCTCCC TCCTCTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0005730--C:nucleolus
GO:0005886--C:plasma membrane
GO:0005667--C:transcription factor complex
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0010669--P:epithelial structure maintenance
GO:0001942--P:hair follicle development
GO:0044089--P:positive regulation of cellular component biogenesis
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	24.06	1.00e-03	38.90
IUUC-Aml-002031	Ailuropoda melanoleuca	76.67	1.00e-150	526.00
IUUC-Atr-003083	Amborella trichopoda	21.39	2.00e-04	41.20
IUUC-Apl-004210	Anas platyrhynchos	76.53	4.00e-120	424.00
IUUC-Aca-005241	Anolis carolinensis	78.77	5.00e-157	546.00
IUUC-Aly-006204	Arabidopsis lyrata	24.40	2.00e-06	47.80
IUUC-Ath-007339	Arabidopsis thaliana	24.56	2.00e-06	47.80
IUUC-Ame-010910	Astyanax mexicanus	73.74	6.00e-152	530.00
IUUC-Bgr-012180	Blumeria graminis	21.30	1.00e-06	48.50
IUUC-Bta-012596	Bos taurus	97.32	0.00e+00	676.00
IUUC-Bci-013927	Botrytis cinerea	28.57	1.00e-08	55.10
IUUC-Bol-015721	Brassica oleracea	23.95	8.00e-07	49.30
IUUC-Bra-017183	Brassica rapa	24.40	8.00e-07	49.30
IUUC-Cel-018189	Caenorhabditis elegans	33.77	4.00e-29	122.00
IUUC-Cja-019586	Callithrix jacchus	99.46	0.00e+00	701.00
IUUC-Cfa-021188	Canis familiaris	76.67	2.00e-150	525.00
IUUC-Cpo-022350	Cavia porcellus	77.65	3.00e-153	534.00
IUUC-Csa-023816	Chlorocebus sabaeus	77.93	4.00e-155	540.00
IUUC-Cho-024958	Choloepus hoffmanni	80.58	9.00e-94	337.00
IUUC-Cin-025721	Ciona intestinalis	53.73	2.00e-93	335.00
IUUC-Csv-026065	Ciona savignyi	56.04	4.00e-97	347.00
IUUC-Dre-027356	Danio rerio	82.56	0.00e+00	627.00
IUUC-Dno-029918	Dasypus novemcinctus	77.04	6.00e-147	513.00
IUUC-Dor-030634	Dipodomys ordii	77.65	5.00e-155	540.00
IUUC-Dse-031245	Dothistroma septosporum	25.00	4.00e-04	40.00
IUUC-Dme-031667	Drosophila melanogaster	63.56	2.00e-123	436.00
IUUC-Ete-032246	Echinops telfairi	95.98	0.00e+00	669.00
IUUC-Eca-034015	Equus caballus	98.93	0.00e+00	698.00
IUUC-Eeu-034902	Erinaceus europaeus	77.65	5.00e-155	540.00
IUUC-Fca-035903	Felis catus	77.22	2.00e-153	535.00
IUUC-Fal-037407	Ficedula albicollis	97.59	0.00e+00	664.00
IUUC-Gmo-039466	Gadus morhua	75.77	7.00e-160	556.00
IUUC-Ggr-040030	Gaeumannomyces graminis	23.98	3.00e-05	43.90
IUUC-Gga-040214	Gallus gallus	78.21	3.00e-154	538.00
IUUC-Gac-042214	Gasterosteus aculeatus	75.35	2.00e-161	561.00
IUUC-Gma-042794	Glycine max	24.34	1.00e-08	55.50
IUUC-Hsa-046092	Homo sapiens	99.20	0.00e+00	695.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	77.65	8.00e-155	539.00
IUUC-Lch-049895	Latimeria chalumnae	88.35	8.00e-109	385.00
IUUC-Lpe-050806	Leersia perrieri	26.76	4.00e-05	43.50
IUUC-Loc-052845	Lepisosteus oculatus	78.21	7.00e-158	550.00
IUUC-Lma-053090	Leptosphaeria maculans	25.20	3.00e-06	47.40
IUUC-Laf-054538	Loxodonta africana	76.69	2.00e-157	548.00
IUUC-Mcc-055116	Macaca mulatta	97.06	7.00e-158	549.00
IUUC-Meu-056777	Macropus eugenii	72.63	7.00e-140	489.00
IUUC-Mpo-057376	Magnaporthe poae	24.28	2.00e-05	45.10
IUUC-Mtr-058142	Medicago truncatula	25.38	4.00e-08	53.90
IUUC-Mga-059716	Meleagris gallopavo	96.51	0.00e+00	659.00
IUUC-Mmr-060649	Microcebus murinus	98.93	0.00e+00	702.00
IUUC-Mdo-062535	Monodelphis domestica	98.12	0.00e+00	682.00
IUUC-Mmu-064036	Mus musculus	96.78	0.00e+00	687.00
IUUC-Mac-065338	Musa acuminata	24.02	6.00e-06	46.60
IUUC-Mpu-065719	Mustela putorius furo	77.65	8.00e-155	539.00
IUUC-Mlu-067219	Myotis lucifugus	76.67	5.00e-152	530.00
IUUC-Ncr-068691	Neurospora crassa	20.61	4.00e-04	40.40
IUUC-Nle-068983	Nomascus leucogenys	99.72	0.00e+00	667.00
IUUC-Opr-070467	Ochotona princeps	77.65	5.00e-155	540.00
IUUC-Ont-071566	Oreochromis niloticus	76.82	3.00e-162	564.00
IUUC-Oan-073368	Ornithorhynchus anatinus	78.49	1.00e-155	542.00
IUUC-Ocu-074854	Oryctolagus cuniculus	98.04	0.00e+00	667.00
IUUC-Ola-086364	Oryzias latipes	77.09	1.00e-161	562.00
IUUC-Oga-088235	Otolemur garnettii	97.86	0.00e+00	688.00
IUUC-Oar-089547	Ovis aries	76.67	1.00e-150	526.00
IUUC-Ptr-091423	Pan troglodytes	99.46	0.00e+00	701.00
IUUC-Pan-092378	Papio anubis	77.93	2.00e-155	541.00
IUUC-Psi-093638	Pelodiscus sinensis	97.59	0.00e+00	669.00
IUUC-Pma-094384	Petromyzon marinus	62.92	2.00e-53	201.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.18	6.00e-07	49.70
IUUC-Pfo-096031	Poecilia formosa	75.98	3.00e-163	567.00
IUUC-Pab-097886	Pongo abelii	99.72	0.00e+00	667.00
IUUC-Pop-099430	Populus trichocarpa	25.82	1.00e-06	48.90
IUUC-Pca-101138	Procavia capensis	77.65	5.00e-155	540.00
IUUC-Ppe-101293	Prunus persica	23.87	2.00e-07	50.80
IUUC-Pva-103215	Pteropus vampyrus	98.66	0.00e+00	701.00
IUUC-Pte-104238	Pyrenophora teres	29.49	1.00e-05	44.70
IUUC-Rno-105968	Rattus norvegicus	97.59	0.00e+00	693.00
IUUC-Sha-107595	Sarcophilus harrisii	77.65	7.00e-153	533.00
IUUC-Sja-107950	Schizosaccharomyces japonicus	16.97	3.00e-05	43.10
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.68	3.00e-06	47.00
IUUC-Smo-109552	Selaginella moellendorffii	19.70	4.00e-06	47.00
IUUC-Sly-110873	Solanum lycopersicum	26.09	4.00e-07	50.40
IUUC-Stu-112586	Solanum tuberosum	20.96	7.00e-06	46.20
IUUC-Sar-113076	Sorex araneus	91.53	1.00e-135	476.00
IUUC-Sre-115143	Sporisorium reilianum	23.81	1.10e-01	32.00
IUUC-Ssc-115755	Sus scrofa	77.09	3.00e-152	531.00
IUUC-Tgu-117326	Taeniopygia guttata	97.32	0.00e+00	662.00
IUUC-Tru-117858	Takifugu rubripes	84.88	0.00e+00	650.00
IUUC-Tsy-119296	Tarsius syrichta	92.23	0.00e+00	632.00
IUUC-Tni-119822	Tetraodon nigroviridis	76.34	3.00e-160	557.00
IUUC-Tca-120935	Theobroma cacao	25.38	4.00e-08	53.90
IUUC-Tbe-127366	Tupaia belangeri	76.82	1.00e-149	522.00
IUUC-Ttr-128484	Tursiops truncatus	87.94	7.00e-174	602.00
IUUC-Vpa-130304	Vicugna pacos	98.65	7.00e-156	542.00
IUUC-Vvi-131560	Vitis vinifera	23.01	7.00e-06	46.20
IUUC-Xtr-132062	Xenopus tropicalis	78.21	2.00e-154	538.00
IUUC-Xma-134288	Xiphophorus maculatus	77.09	5.00e-163	566.00
IUUC-Yli-134374	Yarrowia lipolytica	20.47	2.00e-03	37.70
IUUC-Zma-135310	Zea mays	24.61	4.00e-04	40.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence