iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099297

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTR_0003s07090g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s07090	POPTR_0003s07090.1	POPTR_0003s07090.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-08	35.4	99	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+d    ++  ++lp C+H fh+dC+ +w       + + +CPlCr
   Q: 99   CAVCLSDVvegEK-ARLLPkCNHGFHHDCIDMW------FQSHSTCPLCR 141
           ********77544.899999*************......9999******8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGRLDDTATV EIAGKIMIIA IIVLFLVVVF VIFLHLYAKW FWWRVEEPTQ PQQSRRRQRR 60
RFVFTPGQDP VRRGLDLSIR RSLPVVIFQS KDFPDGLECA VCLSDVVEGE KARLLPKCNH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGGATTG GACTTGTCAA ATTACACCAA TACCATTCTA GGTAAAAATA AGAAGTTGAT 60
TAGCAGCAGT AGTGAGTAAT AATGATTGAA TAATTTTGAG TTTTAAATTT TTAATCCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0003s07090g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000301	Aegilops tauschii	45.78	8.00e-19	85.90
IUUC-Atr-003085	Amborella trichopoda	42.67	5.00e-34	137.00
IUUC-Aly-005421	Arabidopsis lyrata	42.71	8.00e-48	183.00
IUUC-Ath-006957	Arabidopsis thaliana	41.92	2.00e-44	172.00
IUUC-Bol-015888	Brassica oleracea	47.83	3.00e-39	154.00
IUUC-Bra-016720	Brassica rapa	47.83	1.00e-38	152.00
IUUC-Hvu-047652	Hordeum vulgare	45.03	2.00e-28	118.00
IUUC-Lpe-051092	Leersia perrieri	45.95	4.00e-22	98.20
IUUC-Mac-065123	Musa acuminata	43.48	8.00e-36	143.00
IUUC-Oba-074984	Oryza barthii	54.17	6.00e-25	107.00
IUUC-Obr-076471	Oryza brachyantha	42.16	6.00e-19	86.70
IUUC-Ogl-077250	Oryza glaberrima	54.17	6.00e-25	107.00
IUUC-Ogu-078929	Oryza glumaepatula	54.17	6.00e-25	107.00
IUUC-Oin-079559	Oryza indica	54.17	6.00e-25	107.00
IUUC-Ome-081596	Oryza meridionalis	53.33	3.00e-22	98.60
IUUC-Oni-082758	Oryza nivara	51.89	2.00e-25	109.00
IUUC-Opu-083878	Oryza punctata	56.38	5.00e-24	104.00
IUUC-Oru-084427	Oryza rufipogon	54.17	6.00e-25	107.00
IUUC-Osa-086236	Oryza sativa	54.17	6.00e-25	107.00
IUUC-Ppe-101738	Prunus persica	67.33	9.00e-46	176.00
IUUC-Sit-109688	Setaria italica	37.61	2.00e-17	82.40
IUUC-Sly-110862	Solanum lycopersicum	46.60	2.00e-43	168.00
IUUC-Stu-112429	Solanum tuberosum	46.13	2.00e-43	168.00
IUUC-Sbi-114427	Sorghum bicolor	45.21	8.00e-31	127.00
IUUC-Tae-123181	Triticum aestivum	36.98	8.00e-27	113.00
IUUC-Tur-126264	Triticum urartu	36.46	3.00e-26	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence