iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076847

Ensembl Protein ID

OB04G25490.1

UniProt Accession

J3LZH4; J3LZH4_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB04G25490	OB04G25490.1	OB04G25490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-25	88.8	555	584
UBD/Beta-Prp	7.20e-44	150.8	645	790

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+  +t+++f ++ t l+++s D tik+W+
   Q: 555  HAVIITDVRFrPNsTQLATSSFDRTIKLWN 584
           67779******777***************9 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvs 111
           v f p++ +++++ + + + ++dv+t  +  +l+gh++ev++v+++++g++l+++s+D ++kvw++s+g+c+h ++ + ++  s+ f+p ++d lv+
   Q: 645  VRFQPNSGQFLAAAAENVVSIFDVETYGKKYTLQGHNSEVQSVCWDSSGQYLASVSQD-LVKVWSISSGECTHEVRSNGNKFHSCVFHPsYSDLLVV 740
           78999999999999*******************************************9.89****************************66799999 PP
   S: 112  GshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           G+  + +++w++ ++q +  t + h+g++  ++ +p + +++s+s D+ v+lW
   Q: 741  GG-YQSLELWNMAKNQSM--TVQAHEGLIAALAQSPVTGMVASASHDNSVKLW 790
           98.899************..799****************************** PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAQSNWEADK MLDVYIYDYL LKRNLQATAK AFMAEGKVST DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEIAAAYLE AQQTKAREHQ QQMQMQQLQL IQQRHAQLQR TNASHPSLNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAGA GCAATTGGGA GGCGGATAAG ATGTAGGCTA TTTCTGTGCC TTTTTTCTTT 60
TAATCCTGCC TGGTTTATGT GATTCCTTTC TGGTTGTGTT AGGATTTATT TCCGATGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000776	Aegilops tauschii	80.92	0.00e+00	645.00
IUUC-Atr-002717	Amborella trichopoda	67.99	1.00e-155	542.00
IUUC-Aly-006471	Arabidopsis lyrata	62.76	0.00e+00	858.00
IUUC-Ath-007671	Arabidopsis thaliana	61.10	0.00e+00	855.00
IUUC-Bdi-014855	Brachypodium distachyon	83.94	0.00e+00	1242.00
IUUC-Bol-016419	Brassica oleracea	59.03	0.00e+00	847.00
IUUC-Bra-017537	Brassica rapa	57.85	0.00e+00	822.00
IUUC-Gma-044008	Glycine max	65.38	0.00e+00	927.00
IUUC-Hvu-047358	Hordeum vulgare	81.22	0.00e+00	680.00
IUUC-Lpe-051527	Leersia perrieri	91.92	0.00e+00	1360.00
IUUC-Mtr-058582	Medicago truncatula	64.42	0.00e+00	910.00
IUUC-Mac-064608	Musa acuminata	71.62	0.00e+00	1024.00
IUUC-Oba-075243	Oryza barthii	92.16	0.00e+00	1375.00
IUUC-Ogl-077774	Oryza glaberrima	93.95	0.00e+00	1380.00
IUUC-Ogu-077963	Oryza glumaepatula	92.12	0.00e+00	1372.00
IUUC-Oin-080026	Oryza indica	93.95	0.00e+00	1378.00
IUUC-Olo-080947	Oryza longistaminata	89.38	0.00e+00	1309.00
IUUC-Ome-081723	Oryza meridionalis	91.97	0.00e+00	1371.00
IUUC-Oni-083036	Oryza nivara	92.00	0.00e+00	1372.00
IUUC-Opu-083248	Oryza punctata	93.73	0.00e+00	1382.00
IUUC-Oru-084534	Oryza rufipogon	92.70	0.00e+00	1374.00
IUUC-Osa-085788	Oryza sativa	85.43	0.00e+00	1289.00
IUUC-Ppa-095985	Physcomitrella patens	60.24	2.00e-139	488.00
IUUC-Pop-099999	Populus trichocarpa	63.74	0.00e+00	908.00
IUUC-Ppe-101896	Prunus persica	65.83	0.00e+00	893.00
IUUC-Smo-109593	Selaginella moellendorffii	48.22	0.00e+00	646.00
IUUC-Sit-110618	Setaria italica	85.34	0.00e+00	1273.00
IUUC-Sly-111127	Solanum lycopersicum	62.00	0.00e+00	861.00
IUUC-Stu-112404	Solanum tuberosum	62.83	0.00e+00	859.00
IUUC-Sbi-114046	Sorghum bicolor	84.49	0.00e+00	1258.00
IUUC-Tca-121754	Theobroma cacao	63.32	0.00e+00	868.00
IUUC-Tae-125446	Triticum aestivum	80.93	0.00e+00	1207.00
IUUC-Tur-126636	Triticum urartu	74.50	0.00e+00	1114.00
IUUC-Vvi-130936	Vitis vinifera	64.96	0.00e+00	935.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence