iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022610

Ensembl Protein ID

EDP06750

UniProt Accession

A8I964; A8I964_CHLRE

Genbank Protein ID

EDP06750.1

Protein Name

Hypothetical WD40 domain protein

Genbank Nucleotide ID

DS496114

Gene Name

CHLREDRAFT_195970

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_195970	EDP06750	EDP06750

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-08	31.9	333	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd..tllvsGsdDgtikvWDlrt 32
           +++l+  ++  +  +sG+  g++ +WDlr+
   Q: 333  IYSLQVhPSrpDVCASGGAGGSVALWDLRS 362
           88888883335789*************997 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MPAPGARRQE ISIDGIAERV RWLPSTPPGP ADLDGRLTNH ALVVWGSQDS QEENFLVVHD 60
LVVTSRGSSV LRVEEEVVTA FAHRGKMTDL HVCEQGGGFV TVLFGTTEGG LHLLRLLVPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGCGC CGGGAGCCCG GCGCCAGGAG ATCAGCATCG ATGGTATAGC GGAGCGAGTA 60
CGATGGCTGC CTAGCACGCC ACCTGGGCCT GCGGACCTGG ACGGCCGGCT CACAAACCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

Gene Ontology

GO:0031080--C:nuclear pore outer ring

KEGG

cre:CHLREDRAFT_195970

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002526	Amborella trichopoda	37.29	5.00e-14	70.10
IUUC-Aly-006431	Arabidopsis lyrata	32.50	2.00e-10	58.50
IUUC-Ath-007253	Arabidopsis thaliana	33.33	5.00e-11	60.10
IUUC-Bdi-014758	Brachypodium distachyon	34.43	1.00e-11	62.40
IUUC-Bol-016489	Brassica oleracea	35.83	1.00e-12	66.60
IUUC-Bra-017838	Brassica rapa	33.88	5.00e-12	63.20
IUUC-Cin-025360	Ciona intestinalis	32.71	3.00e-08	50.80
IUUC-Gma-043812	Glycine max	35.35	4.00e-10	57.00
IUUC-Mac-065317	Musa acuminata	35.00	5.00e-11	60.10
IUUC-Pop-099166	Populus trichocarpa	35.83	3.00e-13	67.40
IUUC-Ppe-101380	Prunus persica	33.05	9.00e-11	59.30
IUUC-Sly-111767	Solanum lycopersicum	33.61	2.00e-11	61.60
IUUC-Stu-112515	Solanum tuberosum	33.61	1.00e-11	62.00
IUUC-Sbi-113809	Sorghum bicolor	31.40	8.00e-10	55.80
IUUC-Tca-121814	Theobroma cacao	36.89	1.00e-13	68.90
IUUC-Tae-123605	Triticum aestivum	36.07	2.00e-12	64.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence