iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006633

UUCD1 version

UUC-ArT-01132

Ensembl Protein ID

AT4G30370.1

UniProt Accession

Q9M0C3; ATL14_ARATH

Genbank Protein ID

CAB81030.1; AEE85757.1; BAC43513.1; AAO63969.1

Protein Name

RING-H2 finger protein ATL14; RING-type E3 ubiquitin transferase ATL14

Genbank Nucleotide ID

AF160182; CP002687; AK118932; BT005549

Gene Name

ATL14; At4g30370; F17I23.290

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G30370	AT4G30370.1	AT4G30370.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	HINT	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	23995086

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	2.10e-06	29.0	115	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +C + f++g   + lp CgHvfh++C+  w        k  +CP+Cr
   Q: 115  CVVCIDGFRQGqwCRKLPrCGHVFHRKCVDLW------LIKVSTCPICR 157
           9*******66666667777*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSITIPYDGS ISREPSPSPP PPKANTKNLP TKILSNFLIG LIMIPVAITA FIFILTSLGF 60
TFFFAFYWFL QRNYRHRLRR HRRHEYSDGL SPRCVKRLPQ FKYCEPSSEY GGDDCVVCID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGGGCCAAA ACTAGTTAAA AAGTTATCGT CAAAAACTGA TATAAAAAAG ATGTCCGAAT 60
ATTCCCGCAT ATAAATATCT ATCAGACAAA CTCTTTTGTA CAATATACTT TGAATCCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010200--P:response to chitin

KEGG

ath:AT4G30370

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005902	Arabidopsis lyrata	90.48	3.00e-64	236.00
IUUC-Bol-015588	Brassica oleracea	62.20	3.00e-46	176.00
IUUC-Bra-017231	Brassica rapa	61.35	4.00e-46	176.00
IUUC-Sly-111550	Solanum lycopersicum	57.14	2.00e-17	81.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence