iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014935

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

LOC100825336; BRADI_4g28830

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G28830	BRADI4G28830.1	BRADI4G28830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-17	63.9	214	253

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllks 38
           gHtd  +++a    + + +v+Gs Dgt ++WD r+g+++++
   Q: 214  GHTDYLHSIAVreaN-HQVVTGSEDGTARIWDCRSGKCTQT 253
           8**********8744.88********************996 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MATATATAQA QAQPAMDARE WDEAAYRRGI LRERDLSCRT LFRAVFFDQR DDPDPDVLLA 60
AASSDGSLAS FSLSSCISSS APTHAAPQPV AAALVDPVCI VQAHSGPAYD VKFYNDPLQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACGG CGACGGCGAC GGCGCAGGCG CAGGCGCAGC CAGCAATGGA CGCGCGCGAG 60
TGGGACGAGG CGGCGTACCG GCGGGGCATC CTGCGGGAGC GCGACCTCTC CTGCCGCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0000347--C:THO complex
GO:0009788--P:negative regulation of abscisic acid-activated signaling pathway
GO:0010267--P:production of ta-siRNAs involved in RNA interference
GO:0016567--P:protein ubiquitination

KEGG

bdi:100825336

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	93.57	0.00e+00	654.00
IUUC-Aml-001693	Ailuropoda melanoleuca	29.55	2.00e-29	122.00
IUUC-Atr-002699	Amborella trichopoda	52.69	6.00e-99	353.00
IUUC-Aca-004231	Anolis carolinensis	29.62	8.00e-33	133.00
IUUC-Aly-006385	Arabidopsis lyrata	54.20	6.00e-105	373.00
IUUC-Ath-006723	Arabidopsis thaliana	54.47	2.00e-104	371.00
IUUC-Ame-010813	Astyanax mexicanus	28.02	1.00e-20	92.00
IUUC-Bta-013458	Bos taurus	28.74	2.00e-28	119.00
IUUC-Bol-015442	Brassica oleracea	53.24	2.00e-101	361.00
IUUC-Bra-017807	Brassica rapa	53.70	3.00e-108	384.00
IUUC-Cja-019061	Callithrix jacchus	30.77	7.00e-30	123.00
IUUC-Cfa-021146	Canis familiaris	28.22	1.00e-28	119.00
IUUC-Cpo-022512	Cavia porcellus	29.55	2.00e-29	121.00
IUUC-Csa-023055	Chlorocebus sabaeus	30.24	6.00e-31	127.00
IUUC-Cho-024693	Choloepus hoffmanni	32.28	1.00e-19	89.00
IUUC-Cin-025181	Ciona intestinalis	31.94	8.00e-35	139.00
IUUC-Csv-025852	Ciona savignyi	29.39	6.00e-33	133.00
IUUC-Dre-028221	Danio rerio	27.55	6.00e-29	120.00
IUUC-Dno-029200	Dasypus novemcinctus	30.67	1.00e-16	78.60
IUUC-Dor-030863	Dipodomys ordii	28.74	3.00e-29	121.00
IUUC-Dme-032016	Drosophila melanogaster	26.24	8.00e-23	100.00
IUUC-Eca-034363	Equus caballus	29.55	1.00e-29	122.00
IUUC-Fca-036546	Felis catus	29.96	1.00e-29	122.00
IUUC-Gmo-038513	Gadus morhua	30.81	1.00e-24	105.00
IUUC-Gac-042606	Gasterosteus aculeatus	29.58	2.00e-29	122.00
IUUC-Gma-043171	Glycine max	55.28	2.00e-118	417.00
IUUC-Ggo-044877	Gorilla gorilla	29.96	3.00e-30	125.00
IUUC-Hsa-045813	Homo sapiens	29.96	3.00e-30	125.00
IUUC-Hvu-047782	Hordeum vulgare	92.67	1.00e-103	367.00
IUUC-Itr-047876	Ictidomys tridecemlineatus	28.92	5.00e-29	120.00
IUUC-Lch-049506	Latimeria chalumnae	29.90	2.00e-34	139.00
IUUC-Lpe-051203	Leersia perrieri	78.99	5.00e-157	546.00
IUUC-Loc-052451	Lepisosteus oculatus	33.33	5.00e-31	127.00
IUUC-Laf-053864	Loxodonta africana	29.96	2.00e-30	125.00
IUUC-Mcc-055705	Macaca mulatta	28.63	3.00e-27	114.00
IUUC-Meu-055926	Macropus eugenii	29.55	4.00e-28	117.00
IUUC-Mtr-058556	Medicago truncatula	57.14	9.00e-122	429.00
IUUC-Mmr-060836	Microcebus murinus	29.96	1.00e-29	122.00
IUUC-Mdo-062534	Monodelphis domestica	29.63	1.00e-27	116.00
IUUC-Mmu-063560	Mus musculus	29.55	3.00e-29	121.00
IUUC-Mac-065134	Musa acuminata	59.46	2.00e-127	447.00
IUUC-Mpu-066031	Mustela putorius furo	29.55	1.00e-29	122.00
IUUC-Mlu-068051	Myotis lucifugus	29.84	3.00e-30	125.00
IUUC-Nle-069080	Nomascus leucogenys	29.55	5.00e-30	124.00
IUUC-Opr-070787	Ochotona princeps	28.34	2.00e-28	119.00
IUUC-Ont-071952	Oreochromis niloticus	31.11	1.00e-29	123.00
IUUC-Oan-073334	Ornithorhynchus anatinus	29.70	2.00e-22	98.60
IUUC-Oba-075175	Oryza barthii	82.35	2.00e-165	574.00
IUUC-Obr-076393	Oryza brachyantha	87.40	2.00e-168	583.00
IUUC-Ogl-077603	Oryza glaberrima	79.85	5.00e-110	389.00
IUUC-Ogu-078211	Oryza glumaepatula	82.09	5.00e-161	559.00
IUUC-Oin-079554	Oryza indica	89.19	6.00e-150	522.00
IUUC-Olo-080922	Oryza longistaminata	72.54	1.00e-118	418.00
IUUC-Ome-081127	Oryza meridionalis	73.44	9.00e-136	476.00
IUUC-Oni-082376	Oryza nivara	82.35	1.00e-161	561.00
IUUC-Opu-083163	Oryza punctata	85.87	2.00e-163	567.00
IUUC-Oru-084311	Oryza rufipogon	82.35	3.00e-161	560.00
IUUC-Osa-085762	Oryza sativa	79.85	6.00e-106	375.00
IUUC-Oga-088804	Otolemur garnettii	28.92	2.00e-29	122.00
IUUC-Oar-090095	Ovis aries	27.94	1.00e-27	116.00
IUUC-Ptr-090731	Pan troglodytes	29.96	3.00e-30	125.00
IUUC-Pan-092595	Papio anubis	30.28	1.00e-30	126.00
IUUC-Psi-093866	Pelodiscus sinensis	29.70	7.00e-31	127.00
IUUC-Pma-094236	Petromyzon marinus	28.33	2.00e-31	129.00
IUUC-Pfo-096095	Poecilia formosa	30.56	8.00e-33	133.00
IUUC-Pab-098385	Pongo abelii	29.96	3.00e-30	125.00
IUUC-Pop-099433	Populus trichocarpa	56.64	2.00e-118	418.00
IUUC-Pca-101119	Procavia capensis	31.18	1.00e-25	109.00
IUUC-Ppe-101677	Prunus persica	58.15	5.00e-127	446.00
IUUC-Pva-102726	Pteropus vampyrus	30.77	6.00e-32	130.00
IUUC-Rno-105576	Rattus norvegicus	29.15	1.00e-28	119.00
IUUC-Sha-106774	Sarcophilus harrisii	29.55	2.00e-28	118.00
IUUC-Sit-109988	Setaria italica	85.48	1.00e-175	608.00
IUUC-Sly-110864	Solanum lycopersicum	54.61	2.00e-88	318.00
IUUC-Sar-113060	Sorex araneus	27.82	7.00e-26	109.00
IUUC-Sbi-114699	Sorghum bicolor	82.80	5.00e-172	595.00
IUUC-Ssc-116445	Sus scrofa	28.74	3.00e-29	121.00
IUUC-Tru-117834	Takifugu rubripes	29.67	8.00e-30	123.00
IUUC-Tni-119651	Tetraodon nigroviridis	29.17	7.00e-29	120.00
IUUC-Tca-121318	Theobroma cacao	56.28	1.00e-118	418.00
IUUC-Tae-124184	Triticum aestivum	93.83	0.00e+00	658.00
IUUC-Tur-126226	Triticum urartu	86.45	9.00e-137	478.00
IUUC-Tbe-128079	Tupaia belangeri	27.14	5.00e-12	63.90
IUUC-Ttr-128391	Tursiops truncatus	26.61	7.00e-24	103.00
IUUC-Vvi-131148	Vitis vinifera	61.73	6.00e-117	412.00
IUUC-Xtr-132743	Xenopus tropicalis	29.93	6.00e-32	130.00
IUUC-Xma-133722	Xiphophorus maculatus	30.90	2.00e-33	135.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence