iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088804

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03078192

Gene Name

THOC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000008590.2	ENSOGAT00000008591.2	ENSOGAP00000007694.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-14	51.0	166	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gHtd ++cla+   ++ ++sG+ Dgt+++WDlr  + ++
   Q: 166  GHTDYIHCLALreRSPEVLSGGEDGTVRLWDLRMAKEVQ 204
           8**********98559****************9887776 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MERAVPLAVP LGQTEVFQAL QRLHMTIFSQ SVSPCGKFLA AGNNYGQIAI FSLSAALSSE 60
AKEESKKPMV TFQAHDGPIY SMVSTERHLL SAGDGEVKAW LWVEVLKKGC KELWHRQPPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCGAG CGGTGCCACT AGCTGTTCCG CTGGGCCAGG TAAGTCGACT GTGGTGCGAG 60
GTGCCTTCTG GAGTTTGTAG TCTGTGTTCG GCTCGTTCCT TGAACCGTGT TTTGCGTAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	28.82	1.00e-31	130.00
IUUC-Aml-001693	Ailuropoda melanoleuca	95.31	3.00e-179	620.00
IUUC-Atr-002699	Amborella trichopoda	28.52	8.00e-23	101.00
IUUC-Aca-004231	Anolis carolinensis	70.03	3.00e-128	451.00
IUUC-Aly-006385	Arabidopsis lyrata	29.11	1.00e-28	120.00
IUUC-Ath-006723	Arabidopsis thaliana	28.39	9.00e-28	117.00
IUUC-Ame-010813	Astyanax mexicanus	64.19	4.00e-88	317.00
IUUC-Bta-013458	Bos taurus	94.72	3.00e-176	610.00
IUUC-Bdi-014935	Brachypodium distachyon	28.82	4.00e-31	128.00
IUUC-Bol-015442	Brassica oleracea	28.66	7.00e-28	117.00
IUUC-Bra-017807	Brassica rapa	29.94	1.00e-29	124.00
IUUC-Cja-019061	Callithrix jacchus	95.91	8.00e-179	619.00
IUUC-Cfa-021146	Canis familiaris	94.43	2.00e-177	614.00
IUUC-Cpo-022512	Cavia porcellus	94.13	1.00e-177	615.00
IUUC-Csa-023055	Chlorocebus sabaeus	95.60	1.00e-180	625.00
IUUC-Cho-024693	Choloepus hoffmanni	93.81	8.00e-98	348.00
IUUC-Cin-025181	Ciona intestinalis	36.34	2.00e-60	225.00
IUUC-Csv-025852	Ciona savignyi	35.63	6.00e-53	201.00
IUUC-Dre-028221	Danio rerio	59.63	9.00e-121	426.00
IUUC-Dno-029200	Dasypus novemcinctus	88.89	5.00e-87	313.00
IUUC-Dor-030863	Dipodomys ordii	94.13	9.00e-177	612.00
IUUC-Dme-032016	Drosophila melanogaster	29.69	3.00e-40	159.00
IUUC-Eca-034363	Equus caballus	94.72	3.00e-178	617.00
IUUC-Fca-036546	Felis catus	95.89	3.00e-179	620.00
IUUC-Gmo-038513	Gadus morhua	56.51	6.00e-109	387.00
IUUC-Gac-042606	Gasterosteus aculeatus	55.59	3.00e-112	397.00
IUUC-Gma-043171	Glycine max	27.85	2.00e-32	133.00
IUUC-Ggo-044877	Gorilla gorilla	96.19	2.00e-180	624.00
IUUC-Hsa-045813	Homo sapiens	95.60	3.00e-180	624.00
IUUC-Hvu-047782	Hordeum vulgare	29.79	2.00e-22	98.60
IUUC-Itr-047876	Ictidomys tridecemlineatus	94.72	2.00e-178	618.00
IUUC-Lch-049506	Latimeria chalumnae	63.83	4.00e-123	434.00
IUUC-Lpe-051203	Leersia perrieri	29.03	4.00e-25	108.00
IUUC-Loc-052451	Lepisosteus oculatus	51.53	2.00e-92	332.00
IUUC-Laf-053864	Loxodonta africana	93.26	7.00e-175	605.00
IUUC-Mcc-055705	Macaca mulatta	87.72	9.00e-152	529.00
IUUC-Meu-055926	Macropus eugenii	90.83	4.00e-159	553.00
IUUC-Mtr-058556	Medicago truncatula	28.83	4.00e-35	142.00
IUUC-Mmr-060836	Microcebus murinus	96.77	0.00e+00	631.00
IUUC-Mdo-062534	Monodelphis domestica	91.13	2.00e-158	551.00
IUUC-Mmu-063560	Mus musculus	93.84	3.00e-177	613.00
IUUC-Mac-065134	Musa acuminata	27.43	1.00e-27	117.00
IUUC-Mpu-066031	Mustela putorius furo	95.60	2.00e-179	621.00
IUUC-Mlu-068051	Myotis lucifugus	92.67	2.00e-171	594.00
IUUC-Nle-069080	Nomascus leucogenys	95.60	7.00e-179	619.00
IUUC-Opr-070787	Ochotona princeps	90.03	8.00e-167	579.00
IUUC-Ont-071952	Oreochromis niloticus	55.28	1.00e-109	389.00
IUUC-Oan-073334	Ornithorhynchus anatinus	85.38	4.00e-118	417.00
IUUC-Oba-075175	Oryza barthii	29.49	3.00e-26	112.00
IUUC-Obr-076393	Oryza brachyantha	29.95	6.00e-26	111.00
IUUC-Ogl-077603	Oryza glaberrima	36.44	6.00e-19	87.80
IUUC-Ogu-078211	Oryza glumaepatula	29.49	4.00e-26	112.00
IUUC-Oin-079554	Oryza indica	29.49	2.00e-26	112.00
IUUC-Olo-080922	Oryza longistaminata	33.12	3.00e-23	102.00
IUUC-Ome-081127	Oryza meridionalis	23.50	6.00e-13	68.90
IUUC-Oni-082376	Oryza nivara	29.49	3.00e-26	112.00
IUUC-Opu-083163	Oryza punctata	29.03	1.00e-25	110.00
IUUC-Oru-084311	Oryza rufipogon	29.49	5.00e-26	111.00
IUUC-Osa-085762	Oryza sativa	36.44	9.00e-19	87.00
IUUC-Oar-090095	Ovis aries	94.13	1.00e-175	608.00
IUUC-Ptr-090731	Pan troglodytes	95.89	3.00e-180	624.00
IUUC-Pan-092595	Papio anubis	96.20	6.00e-180	622.00
IUUC-Psi-093866	Pelodiscus sinensis	71.19	9.00e-122	429.00
IUUC-Pma-094236	Petromyzon marinus	59.57	2.00e-119	421.00
IUUC-Pfo-096095	Poecilia formosa	55.59	9.00e-109	386.00
IUUC-Pab-098385	Pongo abelii	95.60	1.00e-179	622.00
IUUC-Pop-099433	Populus trichocarpa	26.60	5.00e-30	124.00
IUUC-Pca-101119	Procavia capensis	94.52	1.00e-115	409.00
IUUC-Ppe-101677	Prunus persica	26.60	7.00e-27	114.00
IUUC-Pva-102726	Pteropus vampyrus	95.01	2.00e-179	620.00
IUUC-Rno-105576	Rattus norvegicus	95.01	2.00e-179	620.00
IUUC-Sha-106774	Sarcophilus harrisii	91.13	2.00e-159	554.00
IUUC-Sit-109988	Setaria italica	27.43	2.00e-28	119.00
IUUC-Sly-110864	Solanum lycopersicum	29.76	4.00e-27	115.00
IUUC-Sar-113060	Sorex araneus	86.31	3.00e-126	444.00
IUUC-Sbi-114699	Sorghum bicolor	27.54	6.00e-29	121.00
IUUC-Ssc-116445	Sus scrofa	95.01	8.00e-179	619.00
IUUC-Tru-117834	Takifugu rubripes	56.08	6.00e-116	410.00
IUUC-Tni-119651	Tetraodon nigroviridis	56.52	3.00e-114	404.00
IUUC-Tca-121318	Theobroma cacao	27.08	8.00e-28	117.00
IUUC-Tae-124184	Triticum aestivum	28.82	1.00e-31	130.00
IUUC-Tur-126226	Triticum urartu	29.95	2.00e-28	119.00
IUUC-Tbe-128079	Tupaia belangeri	80.52	1.00e-106	379.00
IUUC-Ttr-128391	Tursiops truncatus	90.94	4.00e-167	580.00
IUUC-Vvi-131148	Vitis vinifera	27.10	1.00e-25	110.00
IUUC-Xtr-132743	Xenopus tropicalis	62.91	3.00e-121	427.00
IUUC-Xma-133722	Xiphophorus maculatus	55.90	2.00e-113	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence