iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099175

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000347

Gene Name

POPTRDRAFT_568920; POPTR_0011s12180g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s12180	POPTR_0011s12180.1	POPTR_0011s12180.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	28.23	6.00e-29	115.00	IUUC-Ots-000041

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSDYLSEDLI QEILYKLPIK SLLRCTSLCK SWNSLIKSPT FIFKHLQHTI SSTDRQNLFL 60
LRLCSREREE QYSLRLDNQD FNEHMQLHFP FKSSESYFHV IGSSNGLICL ANIFRSLIVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGATT ATTTGTCTGA AGATTTGATA CAAGAGATCC TCTACAAACT CCCCATAAAA 60
TCCCTGTTGC GATGCACAAG TTTGTGCAAG TCCTGGAACT CCCTCATAAA GAGCCCAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006527--F-box-assoc_dom_typ1
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF07734--FBA_1

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0011s12180g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afu-009006	Aspergillus fumigatus	31.91	5.10e-01	28.90
IUUC-Bdi-014875	Brachypodium distachyon	25.50	1.00e-12	67.00
IUUC-Bol-016158	Brassica oleracea	27.73	8.00e-25	108.00
IUUC-Cfa-020257	Canis familiaris	22.08	6.20e-01	30.00
IUUC-Cin-025694	Ciona intestinalis	36.36	7.00e-04	38.10
IUUC-Eca-033809	Equus caballus	22.08	1.10e+00	29.30
IUUC-Fca-036510	Felis catus	22.08	5.90e-01	30.00
IUUC-Fal-037541	Ficedula albicollis	25.89	2.30e-02	34.70
IUUC-Gga-040142	Gallus gallus	25.89	5.60e-02	33.50
IUUC-Gma-044203	Glycine max	31.41	4.00e-34	138.00
IUUC-Mga-059329	Meleagris gallopavo	25.89	5.10e-02	33.50
IUUC-Nfi-068413	Neosartorya fischeri	29.79	6.70e-01	28.50
IUUC-Psi-093344	Pelodiscus sinensis	25.00	2.30e-01	31.20
IUUC-Pno-094786	Phaeosphaeria nodorum	28.21	1.10e-01	30.40
IUUC-Ppe-101741	Prunus persica	35.28	1.00e-54	206.00
IUUC-Sly-111384	Solanum lycopersicum	32.15	8.00e-49	187.00
IUUC-Sre-115060	Sporisorium reilianum	33.33	1.00e-03	36.20
IUUC-Tgu-116585	Taeniopygia guttata	25.00	8.60e-02	32.70
IUUC-Tca-121064	Theobroma cacao	46.42	5.00e-87	314.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence