iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095358

Ensembl Protein ID

PP1S16_268V6.1

UniProt Accession

A9TE27; A9TE27_PHYPA

Genbank Protein ID

EDQ58292.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545101

Gene Name

PHYPADRAFT_221366

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S16_268V6	PP1S16_268V6.1	PP1S16_268V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.60e-07	30.7	17	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 17   vnpsd.tVaeLKekiekklgippeqqrLiykGkiL.eddktLadyglkdgstihllek 72
           +++ + tV+ LKe ie ++ ip++   + + +k L edd  L +yg++dg+t+hl+ k
   Q: 17   LPEGAaTVQLLKESIEARERIPARHFGIAFCNKQLiEDDSLLESYGIRDGCTLHLTGK 74
           566666****************99999**9999999*******************977 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MHFFIRNFAG RTVCVSLPEG AATVQLLKES IEARERIPAR HFGIAFCNKQ LIEDDSLLES 60
YGIRDGCTLH LTGKLLGGMQ APVAPKPRLD FLNSRPPANY VAGLGRGATG FTTRSDIGPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCATTTTT TCATACGGAA TTTCGCGGGG AGGACAGTTT GCGTGTCGTT GCCTGAAGGG 60
GCTGCGACTG TGCAGCTTCT GAAGGAGTCG ATTGAAGCGC GAGAGCGCAT TCCTGCGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0802--TPR repeat

Interpro

IPR003107--HAT
IPR010491--PRP1_N
IPR027108--Prp6/Prp1/STA1
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat

PROSITE

PS50005--TPR
PS50293--TPR_REGION

Pfam

PF06424--PRP1_N

SMART

SM00386--HAT
SM00028--TPR

Gene Ontology

GO:0005634--C:nucleus
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

ppp:PHYPADRAFT_221366

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mac-065093	Musa acuminata	65.69	0.00e+00	1179.00
IUUC-Sly-111007	Solanum lycopersicum	61.65	0.00e+00	815.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence