iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075688

Ensembl Protein ID

OBART04G27370.1

UniProt Accession

A0A0D3G0W8; A0A0D3G0W8_9ORYZ

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART04G27370	OBART04G27370.1	OBART04G27370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.20e-82	278.8	176	541

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle..........kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefs 85
           Gl+NlgNtC+mNSvLQ+L++ p+lr+++l           +++ + +  + +++ ++l++ l ++ ++  +++++ +sp ++l + ++ a+++ 
   Q: 176  GLNNLGNTCFMNSVLQALLHAPPLRNYFLGdrhnrylcprQTPMRRRSAEANDKAACLACDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLA 269
           9*****************************88777766553333333333378899************************************** PP
   S: 86   gyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgk 179
           +yeqqDa+Ef+  +ld+++e++k                  +++++  +     ++ +++F g l+s+++c +c+ +s+++ep +d+sl++   
   Q: 270  SYEQQDAHEFFISILDHIHENIK-----------------DDQHKSHAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAG 346
           **********************2.................23445566667777999***********************************87 PP
   S: 180  eetkke.......................slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekin 250
            ++++                        +l  cLe ft++e+l+ e+k++ce+ck++qe+ k++++++lP v ++h+kRf+ s+ +k+++k++
   Q: 347  YNNSLGvanpkvhvrngerssggtntkvsTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVD 440
           7654448899999********************************************************************************* PP
   S: 251  kkvefpleLdlspfcts.................peekqke......kkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevkeee 321
            +++fp +Ld++p+++s                 +            + ++e++av+ HsG+l+ GHYv+y +  +++W+++dD  Vt v+e++
   Q: 441  HCLQFPFSLDMAPYLSSsilrsrfgnrifpseasD-----AdsvsefSSEFEIFAVITHSGKLEAGHYVTYLRL-NNHWYKCDDAWVTRVEEHT 528
           *****************777777777777655441.....14556669**************************.888**************** PP
   S: 322  vleetgstaYvlfYkr 337
           v +   s+aY+lfY +
   Q: 529  VRT---SQAYMLFYVQ 541
           ***...********76 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MTTPSAPPPC PHLAAYRHTT RSLRFLRRCL RVRPLGRPEI RREPRELPRC SPCSSPTSSS 60
SRLYACLSCA AVFCPTHAAS HASASTSGGH QIAVDVDRAE LFCGACGDQV YDPDFDHAVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCACCC CGTCCGCGCC GCCGCCGTGC CCGCACCTCG CCGCGTACCG CCACACCACG 60
CGCTCCCTCC GCTTCCTCCG CCGCTGCCTC CGCGTCCGCC CGCTCGGCCG CCCCGAGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000393	Aegilops tauschii	84.93	0.00e+00	652.00
IUUC-Aml-002084	Ailuropoda melanoleuca	34.00	7.00e-84	303.00
IUUC-Atr-002653	Amborella trichopoda	57.35	6.00e-168	583.00
IUUC-Apl-003433	Anas platyrhynchos	35.81	2.00e-82	298.00
IUUC-Aca-005347	Anolis carolinensis	35.70	2.00e-82	299.00
IUUC-Aly-006565	Arabidopsis lyrata	53.73	4.00e-122	431.00
IUUC-Ath-007536	Arabidopsis thaliana	53.52	1.00e-121	429.00
IUUC-Ago-007811	Ashbya gossypii	26.61	5.00e-41	161.00
IUUC-Acl-008124	Aspergillus clavatus	29.77	4.00e-53	201.00
IUUC-Afl-008464	Aspergillus flavus	33.51	2.00e-49	188.00
IUUC-Afu-008912	Aspergillus fumigatus	30.51	6.00e-53	201.00
IUUC-Ani-009168	Aspergillus nidulans	31.33	1.00e-52	199.00
IUUC-Ang-009694	Aspergillus niger	34.91	1.00e-54	206.00
IUUC-Aor-010035	Aspergillus oryzae	33.45	1.00e-37	149.00
IUUC-Ate-010382	Aspergillus terreus	32.80	1.00e-49	189.00
IUUC-Ame-011253	Astyanax mexicanus	33.81	3.00e-69	255.00
IUUC-Bgr-012150	Blumeria graminis	28.72	1.00e-42	167.00
IUUC-Bta-013303	Bos taurus	34.67	1.00e-84	306.00
IUUC-Bci-013604	Botrytis cinerea	32.40	4.00e-52	198.00
IUUC-Bdi-014171	Brachypodium distachyon	84.42	0.00e+00	823.00
IUUC-Bol-016509	Brassica oleracea	49.36	9.00e-123	433.00
IUUC-Bra-016962	Brassica rapa	50.72	8.00e-117	413.00
IUUC-Cja-019283	Callithrix jacchus	37.25	2.00e-82	298.00
IUUC-Cfa-021239	Canis familiaris	36.33	3.00e-83	301.00
IUUC-Cpo-022354	Cavia porcellus	34.85	2.00e-86	312.00
IUUC-Csa-023145	Chlorocebus sabaeus	35.04	1.00e-85	310.00
IUUC-Cho-024863	Choloepus hoffmanni	30.12	2.00e-28	119.00
IUUC-Cin-025109	Ciona intestinalis	32.66	3.00e-54	204.00
IUUC-Csv-026214	Ciona savignyi	31.96	9.00e-67	247.00
IUUC-Cgl-026457	Colletotrichum gloeosporioides	27.40	4.00e-50	191.00
IUUC-Cne-027085	Cryptococcus neoformans	29.49	9.00e-55	207.00
IUUC-Dre-027433	Danio rerio	36.61	1.00e-81	296.00
IUUC-Dno-030095	Dasypus novemcinctus	36.73	5.00e-84	304.00
IUUC-Dor-030832	Dipodomys ordii	39.13	7.00e-36	144.00
IUUC-Dse-031415	Dothistroma septosporum	31.40	2.00e-64	239.00
IUUC-Dme-032074	Drosophila melanogaster	33.14	3.00e-63	235.00
IUUC-Ete-033175	Echinops telfairi	28.45	3.00e-45	175.00
IUUC-Eca-033736	Equus caballus	36.33	7.00e-83	300.00
IUUC-Eeu-035268	Erinaceus europaeus	29.95	2.00e-30	126.00
IUUC-Fca-035861	Felis catus	36.53	1.00e-83	303.00
IUUC-Fal-037645	Ficedula albicollis	35.81	2.00e-82	299.00
IUUC-Fox-038046	Fusarium oxysporum	27.43	6.00e-45	174.00
IUUC-Fso-038321	Fusarium solani	27.02	8.00e-44	170.00
IUUC-Gmo-038474	Gadus morhua	40.72	2.00e-59	222.00
IUUC-Ggr-040044	Gaeumannomyces graminis	30.34	5.00e-45	174.00
IUUC-Gga-040624	Gallus gallus	35.81	2.00e-82	299.00
IUUC-Gac-042197	Gasterosteus aculeatus	33.46	3.00e-79	288.00
IUUC-Gma-042897	Glycine max	65.80	3.00e-152	531.00
IUUC-Ggo-044409	Gorilla gorilla	34.85	1.00e-85	310.00
IUUC-Hsa-046521	Homo sapiens	34.85	1.00e-85	310.00
IUUC-Hvu-047739	Hordeum vulgare	87.03	0.00e+00	677.00
IUUC-Itr-048375	Ictidomys tridecemlineatus	35.04	1.00e-85	309.00
IUUC-Kpa-049135	Komagataella pastoris	29.58	2.00e-53	202.00
IUUC-Lch-050537	Latimeria chalumnae	34.85	2.00e-84	305.00
IUUC-Lpe-050969	Leersia perrieri	96.09	0.00e+00	701.00
IUUC-Loc-052765	Lepisosteus oculatus	30.66	1.00e-63	236.00
IUUC-Lma-053105	Leptosphaeria maculans	35.59	2.00e-52	199.00
IUUC-Laf-053571	Loxodonta africana	36.33	1.00e-83	303.00
IUUC-Mcc-055166	Macaca mulatta	35.04	1.00e-85	310.00
IUUC-Mor-057103	Magnaporthe oryzae	29.87	6.00e-50	191.00
IUUC-Mpo-057621	Magnaporthe poae	29.82	6.00e-45	174.00
IUUC-Mtr-057769	Medicago truncatula	56.80	4.00e-172	597.00
IUUC-Mla-059185	Melampsora laricipopulina	29.46	7.00e-39	154.00
IUUC-Mga-059709	Meleagris gallopavo	35.81	2.00e-82	298.00
IUUC-Mvi-060530	Microbotryum violaceum	30.24	2.00e-49	189.00
IUUC-Mmr-060988	Microcebus murinus	35.04	2.00e-85	309.00
IUUC-Mdo-063065	Monodelphis domestica	34.67	2.00e-84	305.00
IUUC-Mmu-063829	Mus musculus	34.92	9.00e-85	306.00
IUUC-Mac-065419	Musa acuminata	59.38	4.00e-130	457.00
IUUC-Mpu-066433	Mustela putorius furo	34.00	5.00e-84	304.00
IUUC-Mlu-067330	Myotis lucifugus	34.00	1.00e-82	299.00
IUUC-Nfi-068423	Neosartorya fischeri	29.74	8.00e-53	200.00
IUUC-Ncr-068809	Neurospora crassa	28.50	2.00e-48	186.00
IUUC-Nle-069084	Nomascus leucogenys	40.21	2.00e-78	285.00
IUUC-Opr-070469	Ochotona princeps	36.51	4.00e-61	228.00
IUUC-Ont-071961	Oreochromis niloticus	33.45	1.00e-77	283.00
IUUC-Oan-073565	Ornithorhynchus anatinus	34.08	1.00e-77	283.00
IUUC-Ocu-074951	Oryctolagus cuniculus	34.19	2.00e-83	302.00
IUUC-Obr-076652	Oryza brachyantha	98.17	0.00e+00	743.00
IUUC-Ogl-077910	Oryza glaberrima	96.98	0.00e+00	881.00
IUUC-Ogu-078479	Oryza glumaepatula	96.80	0.00e+00	880.00
IUUC-Oin-079697	Oryza indica	99.75	0.00e+00	754.00
IUUC-Olo-080811	Oryza longistaminata	100.00	3.00e-165	573.00
IUUC-Ome-081706	Oryza meridionalis	95.06	0.00e+00	846.00
IUUC-Oni-083070	Oryza nivara	96.80	0.00e+00	879.00
IUUC-Opu-083605	Oryza punctata	99.46	0.00e+00	722.00
IUUC-Oru-084522	Oryza rufipogon	96.98	0.00e+00	881.00
IUUC-Osa-085351	Oryza sativa	99.50	0.00e+00	753.00
IUUC-Ola-086743	Oryzias latipes	40.69	1.00e-79	289.00
IUUC-Olu-087695	Ostreococcus lucimarinus	34.99	4.00e-56	211.00
IUUC-Oga-089131	Otolemur garnettii	35.43	2.00e-85	309.00
IUUC-Oar-089319	Ovis aries	36.33	4.00e-83	301.00
IUUC-Ptr-090783	Pan troglodytes	36.33	9.00e-84	303.00
IUUC-Pan-092927	Papio anubis	35.04	9.00e-86	310.00
IUUC-Psi-093670	Pelodiscus sinensis	35.61	2.00e-82	298.00
IUUC-Pma-094323	Petromyzon marinus	32.73	4.00e-60	224.00
IUUC-Pno-095141	Phaeosphaeria nodorum	26.88	3.00e-42	165.00
IUUC-Ppa-095413	Physcomitrella patens	58.81	4.00e-126	444.00
IUUC-Pfo-096473	Poecilia formosa	34.92	9.00e-84	303.00
IUUC-Pab-097612	Pongo abelii	35.04	1.00e-85	310.00
IUUC-Pop-099558	Populus trichocarpa	56.92	0.00e+00	629.00
IUUC-Pca-100329	Procavia capensis	34.00	2.00e-85	309.00
IUUC-Ppe-102020	Prunus persica	67.43	4.00e-159	554.00
IUUC-Pva-102721	Pteropus vampyrus	32.54	2.00e-76	279.00
IUUC-Pgr-103657	Puccinia graminis	25.51	1.00e-33	137.00
IUUC-Pte-104340	Pyrenophora teres	31.91	7.00e-44	171.00
IUUC-Pyt-104782	Pyrenophora triticirepentis	33.90	1.00e-50	193.00
IUUC-Rno-105247	Rattus norvegicus	35.04	3.00e-85	308.00
IUUC-Sce-106247	Saccharomyces cerevisiae	24.77	2.00e-37	149.00
IUUC-Sha-107429	Sarcophilus harrisii	30.67	1.00e-34	140.00
IUUC-Sja-107656	Schizosaccharomyces japonicus	26.46	6.00e-45	174.00
IUUC-Spo-108226	Schizosaccharomyces pombe	30.77	1.00e-48	186.00
IUUC-Ssl-108531	Sclerotinia sclerotiorum	31.71	3.00e-50	192.00
IUUC-Smo-109310	Selaginella moellendorffii	50.18	2.00e-135	475.00
IUUC-Sit-109716	Setaria italica	87.26	0.00e+00	806.00
IUUC-Sly-111077	Solanum lycopersicum	58.06	2.00e-124	439.00
IUUC-Stu-112203	Solanum tuberosum	58.81	3.00e-125	441.00
IUUC-Sar-113174	Sorex araneus	34.25	2.00e-73	268.00
IUUC-Sbi-114205	Sorghum bicolor	85.31	0.00e+00	813.00
IUUC-Sre-115195	Sporisorium reilianum	30.23	1.00e-28	121.00
IUUC-Ssc-115315	Sus scrofa	33.94	4.00e-83	301.00
IUUC-Tgu-116938	Taeniopygia guttata	36.53	4.00e-83	301.00
IUUC-Tru-118304	Takifugu rubripes	33.87	6.00e-81	294.00
IUUC-Tsy-119413	Tarsius syrichta	40.48	6.00e-78	284.00
IUUC-Tni-120661	Tetraodon nigroviridis	34.24	1.00e-81	296.00
IUUC-Tca-121716	Theobroma cacao	66.50	7.00e-157	546.00
IUUC-Tre-122139	Trichoderma reesei	28.10	1.00e-46	179.00
IUUC-Tvi-122599	Trichoderma virens	28.29	2.00e-47	182.00
IUUC-Tae-125608	Triticum aestivum	82.97	0.00e+00	856.00
IUUC-Tme-127115	Tuber melanosporum	31.29	2.00e-63	236.00
IUUC-Tbe-127423	Tupaia belangeri	29.00	7.00e-26	111.00
IUUC-Ttr-129006	Tursiops truncatus	34.08	7.00e-82	297.00
IUUC-Uma-129455	Ustilago maydis	30.74	2.00e-30	127.00
IUUC-Vda-129829	Verticillium dahliae	27.85	3.00e-34	138.00
IUUC-Vvi-131477	Vitis vinifera	51.26	8.00e-142	496.00
IUUC-Xtr-132444	Xenopus tropicalis	34.41	6.00e-84	304.00
IUUC-Xma-133190	Xiphophorus maculatus	37.55	1.00e-80	292.00
IUUC-Yli-134357	Yarrowia lipolytica	28.94	9.00e-46	177.00
IUUC-Zma-134945	Zea mays	83.87	0.00e+00	774.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence