iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098932

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_817426; POPTR_0003s14260g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s14260	POPTR_0003s14260.1	POPTR_0003s14260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.90e-07	30.4	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f  k+++l  p C+Hvfh dC+++w         + +CPlCr
   Q: 101  CCVCLGEFeiKEELLQIPsCKHVFHIDCIHHW------LHSNSTCPLCR 143
           ******9998666887778*************......9999******8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGLPQSPTPS HLYPQELQLK LYQAFIFSIP ILFSIILFLL FYLFYLKRRT PSLSSPPRVI 60
QRSSSQATRY HVSSIYQKEE ITNKLPTVLF DEELRTKDSQ CCVCLGEFEI KEELLQIPSC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAATACAT TCAACTAGGC ATTTAACTCT TCCATGAAAC TTCAACTGAA CTGGTCATTA 60
CTTTCTACAT CCAGTCATTT TTGAATCTCG GAGACTGATG GGCCTCCCTC AATCCCCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0003s14260g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006218	Arabidopsis lyrata	61.90	1.00e-24	105.00
IUUC-Ath-007578	Arabidopsis thaliana	61.90	2.00e-24	104.00
IUUC-Bol-016088	Brassica oleracea	62.58	8.00e-33	132.00
IUUC-Bra-018105	Brassica rapa	63.64	3.00e-35	140.00
IUUC-Gma-043997	Glycine max	59.14	8.00e-31	126.00
IUUC-Mtr-058468	Medicago truncatula	58.72	5.00e-35	140.00
IUUC-Ppe-101687	Prunus persica	71.03	2.00e-41	162.00
IUUC-Smo-109572	Selaginella moellendorffii	42.65	6.00e-23	100.00
IUUC-Sly-110876	Solanum lycopersicum	67.57	3.00e-38	150.00
IUUC-Stu-112209	Solanum tuberosum	67.35	1.00e-38	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence