iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000060312.7	ENSDART00000114410.5	ENSDARP00000098255.4
ENSDARG00000060312.7	ENSDART00000143726.1	ENSDARP00000116243.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-32	109.0	145	183
UBD/Beta-Prp	2.10e-61	208.6	484	744

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGs..dDgtikvWDlrtgvll 36
           H+ +v+c+af ++  ++vs +  +D t+ vW++++g+++
   Q: 145  HKYGVSCVAFsPNgSYIVSVGyqHDRTVSVWEWKKGTVI 183
           9999*******777*******9***********999765 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk...ilvtgseDrtikvwdls.tgkcvhtlkghe 94
           ks i+++ +spd+++la+g r+g ++++ ++ ++ l++++ h++ev ++ fsp +    +l+++s+Dr+i+++d++ ++  v+t+  h+
   Q: 484  KSGIRVLGISPDGQHLAAGDRSGNLRIFGLQFMDELQKIEAHDSEVLCLAFSPAETglhLLASASRDRLIHIFDMDsKCNLVQTVYDHS 572
           566788889*********************************************99999****************9789999******* PP
   S: 95   dsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvv.....vhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
           +s+++++f    s   +vs ++d+ +     e+ +    ++s  +++v  ++     ++ +    + ++ Dr +r++++k+gk+ + ++
   Q: 573  ASITAVKFTGlnSELCMVSCGADKSVYFRSAEKTSDGL-VFSRSHHIVEKTTlydmdLDATRTHTAIACQDRNIRVYNVKSGKMKKCFK 660
           *********98555899*******99885555555555.67777777766541111156777889999********************7 PP
   S: 177  gghtdsvysls..fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllk 258
           g  +d+ + l+  +d++g +l++   d+ + ++d+++gecv tl gh++ v+ ++fs++  +l+++s D  +++W l+s+ +++
   Q: 661  GSMNDDGTLLKvqLDPSGMFLATSCSDKNICVFDYESGECVATLFGHSEIVTGMKFSQDCRHLITVSGDSCVFVWRLDSQMTNS 744
           77777766666559*************************************************************555544433 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MADGAVNFGA SMNQSCLTSR AKKANNNSTS VPANTRRKTR QSHRRDIHNR VVLEKVLGIT 60
ASSSSALTCD PNTGLVAYPA GCVIVILSPK KNKQTHIFNT SRKTFSALAF SQNGKYLVTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGACAGCG TTCATCTAAT ATTTAAATGC AAACTAACAT GTGATTATAA AGCCTTGTTT 60
ACTTATTGAA CCGTTTTAAA GAAGATTTTT ACATTATGGC GGATGGAGCG GTGAATTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR030545--WDR62

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

dre:570949

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001371	Ailuropoda melanoleuca	42.65	0.00e+00	1035.00
IUUC-Aly-006434	Arabidopsis lyrata	31.35	1.00e-63	238.00
IUUC-Afu-008757	Aspergillus fumigatus	23.13	4.00e-31	130.00
IUUC-Ame-010799	Astyanax mexicanus	62.15	0.00e+00	1712.00
IUUC-Bci-013828	Botrytis cinerea	23.19	7.00e-31	129.00
IUUC-Bol-016347	Brassica oleracea	30.00	1.00e-98	355.00
IUUC-Bra-017959	Brassica rapa	31.09	3.00e-101	363.00
IUUC-Cre-022999	Chlamydomonas reinhardtii	29.70	1.00e-15	79.00
IUUC-Cho-024310	Choloepus hoffmanni	47.81	1.00e-171	597.00
IUUC-Dse-031501	Dothistroma septosporum	27.72	8.00e-25	109.00
IUUC-Dme-032179	Drosophila melanogaster	47.99	0.00e+00	750.00
IUUC-Fca-035826	Felis catus	42.68	0.00e+00	1037.00
IUUC-Ggr-039729	Gaeumannomyces graminis	22.30	4.00e-23	103.00
IUUC-Gma-043644	Glycine max	30.02	6.00e-104	372.00
IUUC-Ggo-045152	Gorilla gorilla	41.66	0.00e+00	999.00
IUUC-Hsa-045891	Homo sapiens	56.71	0.00e+00	973.00
IUUC-Lch-049669	Latimeria chalumnae	59.15	0.00e+00	962.00
IUUC-Loc-052488	Lepisosteus oculatus	60.68	0.00e+00	1264.00
IUUC-Mcc-054994	Macaca mulatta	57.01	0.00e+00	980.00
IUUC-Meu-056815	Macropus eugenii	51.39	0.00e+00	896.00
IUUC-Mtr-058383	Medicago truncatula	30.63	8.00e-55	207.00
IUUC-Mmr-060693	Microcebus murinus	42.79	0.00e+00	1030.00
IUUC-Mdo-063007	Monodelphis domestica	56.59	0.00e+00	1009.00
IUUC-Mpu-066532	Mustela putorius furo	41.82	0.00e+00	1031.00
IUUC-Ncr-068758	Neurospora crassa	23.42	3.00e-29	124.00
IUUC-Ont-072333	Oreochromis niloticus	61.03	0.00e+00	1192.00
IUUC-Ptr-090553	Pan troglodytes	56.61	0.00e+00	982.00
IUUC-Pfo-096069	Poecilia formosa	62.96	0.00e+00	994.00
IUUC-Pab-098510	Pongo abelii	56.54	0.00e+00	984.00
IUUC-Pop-099155	Populus trichocarpa	31.65	2.00e-102	367.00
IUUC-Pva-102895	Pteropus vampyrus	49.55	0.00e+00	1017.00
IUUC-Sha-107013	Sarcophilus harrisii	49.78	0.00e+00	1035.00
IUUC-Sly-110969	Solanum lycopersicum	31.08	7.00e-99	355.00
IUUC-Stu-112838	Solanum tuberosum	32.62	2.00e-60	227.00
IUUC-Sar-113261	Sorex araneus	56.89	0.00e+00	981.00
IUUC-Tru-118566	Takifugu rubripes	66.16	0.00e+00	1048.00
IUUC-Tsy-118799	Tarsius syrichta	56.71	9.00e-158	551.00
IUUC-Tni-120316	Tetraodon nigroviridis	67.21	0.00e+00	926.00
IUUC-Tca-121475	Theobroma cacao	30.75	6.00e-102	365.00
IUUC-Tme-127128	Tuber melanosporum	22.43	4.00e-27	117.00
IUUC-Ttr-128722	Tursiops truncatus	40.46	0.00e+00	968.00
IUUC-Vpa-130392	Vicugna pacos	58.12	4.00e-55	209.00
IUUC-Vvi-131035	Vitis vinifera	33.16	7.00e-116	412.00
IUUC-Xma-133027	Xiphophorus maculatus	56.67	0.00e+00	1072.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence