iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000000906.1	ENSONIT00000001144.1	ENSONIP00000001145.1
ENSONIG00000000906.1	ENSONIT00000001145.1	ENSONIP00000001146.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-33	112.8	698	729
UBD/Beta-Prp	8.40e-62	209.4	479	728

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ vt+++f sd ++l+s s+D  i vW+l
   Q: 698  GHSEIVTGIKFtSDcRHLISVSGDSCIFVWRL 729
           8***********999***************97 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk...ilvtgseDrtikvwdls.tgkcvhtlkghedsv 97
           i+ +++spd+++la+g r+g+++v+d++++  + +++ h+ae+ ++++s+ +    +l+t+s+Dr+i+v d + +++ v+tl +h++s+
   Q: 479  IRTICVSPDGKHLASGDRNGMLRVHDLSSMEEILKVEAHDAEILSLEYSKPETglkLLATASRDRLIHVLDAEdDYSLVQTLDEHSSSI 567
           5669********************************************99877788**************998799************* PP
   S: 98   lslsfsp..sgdklvsGshdrtirv...wdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...tg 177
           ++++f +  ++ +++s ++d+ i      +++ g++++     +++ +   + v+ ++++ + G+ Dr++r++++++gk  +      +
   Q: 568  TAVRFAAndNKVRMISCGADKSIYFrtaHKTDRGTEFRRsHHMVRKTTLYDMDVDATCKYAAVGCQDRCIRIFNISSGKQKKLYkgsLS 656
           *******6556789*********9988888888888886666677777778899999******************66666666544255 PP
   S: 178  ghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
             ++s   +++d++g+++++   d+ + ++d+ tgecv t+ gh++ v+ ++f+++  +l+s+s D  i++W 
   Q: 657  -EDGSLLRVQIDPSGQYVATSCSDKNISIFDFYTGECVATMFGHSEIVTGIKFTSDCRHLISVSGDSCIFVWR 728
           .899999999**************************************************************4 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MPGDGFTIKS RIRKLLHSPS TGKKNCKENL TNKVTLEKVL GITSSGNSAL ACDPRSGLVA 60
YPAGCVVVLL NPKKNRQHHI INTSRKTITA LSFSPDGKHL VTGESGHLPA VRVWDVAERK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCAAAAATA AGTGCAGTGT GCTCTGAAAC GATGTGGTTT GAATGCAGAT CTTCCAAGAA 60
GACATTTCAG AATTGAATTC TCATTCAAAT GGATGAGTTC CTTAACACGC ACTAATTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003165	Amborella trichopoda	33.85	9.00e-122	431.00
IUUC-Aly-006434	Arabidopsis lyrata	31.36	4.00e-59	223.00
IUUC-Ath-007624	Arabidopsis thaliana	30.95	2.00e-93	338.00
IUUC-Acl-008257	Aspergillus clavatus	22.87	5.00e-31	130.00
IUUC-Afu-008757	Aspergillus fumigatus	23.42	1.00e-37	152.00
IUUC-Ate-010425	Aspergillus terreus	24.32	2.00e-30	128.00
IUUC-Bci-013828	Botrytis cinerea	25.57	4.00e-38	154.00
IUUC-Bol-016347	Brassica oleracea	31.37	2.00e-91	331.00
IUUC-Bra-017959	Brassica rapa	31.33	2.00e-94	340.00
IUUC-Cel-018592	Caenorhabditis elegans	27.56	9.00e-72	266.00
IUUC-Cho-024310	Choloepus hoffmanni	50.85	2.00e-155	543.00
IUUC-Csv-026079	Ciona savignyi	44.54	1.00e-80	293.00
IUUC-Dme-032179	Drosophila melanogaster	48.21	0.00e+00	737.00
IUUC-Gmo-039644	Gadus morhua	69.62	0.00e+00	956.00
IUUC-Gac-042491	Gasterosteus aculeatus	72.65	0.00e+00	1202.00
IUUC-Gma-043644	Glycine max	30.54	1.00e-100	361.00
IUUC-Kpa-049269	Komagataella pastoris	25.63	1.00e-14	75.50
IUUC-Lch-049450	Latimeria chalumnae	57.60	0.00e+00	1027.00
IUUC-Lma-053327	Leptosphaeria maculans	25.11	3.00e-36	147.00
IUUC-Nfi-068613	Neosartorya fischeri	24.10	2.00e-38	154.00
IUUC-Ptr-090553	Pan troglodytes	58.41	0.00e+00	902.00
IUUC-Pma-094285	Petromyzon marinus	62.55	0.00e+00	953.00
IUUC-Ppa-095596	Physcomitrella patens	38.24	2.00e-142	501.00
IUUC-Pfo-096375	Poecilia formosa	66.08	0.00e+00	1338.00
IUUC-Pca-100959	Procavia capensis	60.27	0.00e+00	875.00
IUUC-Pte-104373	Pyrenophora teres	33.59	2.00e-16	81.60
IUUC-Pyt-104804	Pyrenophora triticirepentis	27.39	1.00e-16	82.80
IUUC-Smo-109134	Selaginella moellendorffii	36.34	4.00e-135	476.00
IUUC-Sly-110969	Solanum lycopersicum	29.76	1.00e-88	321.00
IUUC-Stu-112838	Solanum tuberosum	31.85	3.00e-57	216.00
IUUC-Sar-113261	Sorex araneus	58.50	0.00e+00	899.00
IUUC-Tru-118280	Takifugu rubripes	65.89	0.00e+00	1238.00
IUUC-Tni-120667	Tetraodon nigroviridis	76.46	0.00e+00	858.00
IUUC-Tca-121475	Theobroma cacao	31.20	1.00e-99	358.00
IUUC-Vda-129957	Verticillium dahliae	23.84	9.00e-16	79.70
IUUC-Vvi-131035	Vitis vinifera	34.15	9.00e-107	381.00
IUUC-Xma-134011	Xiphophorus maculatus	64.48	0.00e+00	1442.00
IUUC-Yli-134437	Yarrowia lipolytica	30.32	3.00e-14	74.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence