iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015511

Ensembl Protein ID

Bo7g016300.1

UniProt Accession

A0A0D3D3N1; A0A0D3D3N1_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo7g016300	Bo7g016300.1	Bo7g016300.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.90e-32	110.7	271	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpI+lelMrdPvv+++G+tydr+sI  w++sg++tcP+t+q l++++l+Pn +l++li  wc ++++
   Q: 271  IPADFRCPITLELMRDPVVVSTGQTYDRESIDLWIKSGHNTCPKTGQVLKHTNLIPNSALKNLIVMWCRDQKI 343
           8*******************************************************************99875 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAVTLEVTPT RKRRPLVVGH LDSPNISDTK LIRSLFFASQ ELSHMQPLRF ILRRNSQSII 60
RKVKVLAAVF DELLRSHMVY SQSAQLCFEE MNIVMQRMKT LIEDCTRSSK LWLLLQIENV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTTA CCCTTGAAGT TACTCCGACG AGAAAAAGAC GTCCTTTGGT CGTCGGACAT 60
CTCGATTCCC CGAATATATC AGATACGAAA CTGATCCGAT CACTGTTCTT CGCATCTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	49.03	2.00e-68	253.00
IUUC-Atr-002566	Amborella trichopoda	44.99	2.00e-129	456.00
IUUC-Aly-005828	Arabidopsis lyrata	82.69	0.00e+00	1058.00
IUUC-Ath-007101	Arabidopsis thaliana	83.04	0.00e+00	1063.00
IUUC-Bdi-014870	Brachypodium distachyon	44.37	1.00e-123	437.00
IUUC-Bra-017197	Brassica rapa	98.66	0.00e+00	1304.00
IUUC-Gma-043531	Glycine max	54.26	1.00e-167	582.00
IUUC-Hvu-047557	Hordeum vulgare	45.20	8.00e-111	394.00
IUUC-Lch-049908	Latimeria chalumnae	37.50	5.00e-08	53.10
IUUC-Lpe-051445	Leersia perrieri	43.13	1.00e-108	387.00
IUUC-Mtr-058241	Medicago truncatula	53.80	1.00e-169	589.00
IUUC-Mac-065033	Musa acuminata	45.42	5.00e-108	385.00
IUUC-Oba-075591	Oryza barthii	44.78	2.00e-112	399.00
IUUC-Obr-076550	Oryza brachyantha	42.68	5.00e-100	358.00
IUUC-Ogl-077709	Oryza glaberrima	44.78	2.00e-112	399.00
IUUC-Ogu-078626	Oryza glumaepatula	44.78	1.00e-112	400.00
IUUC-Oin-080113	Oryza indica	44.78	2.00e-112	399.00
IUUC-Olo-080301	Oryza longistaminata	41.36	2.00e-68	253.00
IUUC-Ome-081924	Oryza meridionalis	44.87	2.00e-114	406.00
IUUC-Oni-082284	Oryza nivara	44.78	1.00e-112	400.00
IUUC-Opu-083971	Oryza punctata	45.32	2.00e-110	393.00
IUUC-Oru-084898	Oryza rufipogon	44.14	3.00e-120	426.00
IUUC-Osa-085986	Oryza sativa	43.21	3.00e-106	379.00
IUUC-Pop-099292	Populus trichocarpa	57.47	0.00e+00	748.00
IUUC-Ppe-101643	Prunus persica	59.52	0.00e+00	772.00
IUUC-Sit-110652	Setaria italica	44.58	5.00e-120	424.00
IUUC-Sly-111346	Solanum lycopersicum	55.91	0.00e+00	726.00
IUUC-Stu-112435	Solanum tuberosum	56.03	0.00e+00	699.00
IUUC-Sbi-114567	Sorghum bicolor	42.69	3.00e-112	399.00
IUUC-Tca-121203	Theobroma cacao	61.55	0.00e+00	786.00
IUUC-Tae-124205	Triticum aestivum	43.26	8.00e-103	367.00
IUUC-Vvi-131545	Vitis vinifera	60.06	0.00e+00	693.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence