iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109396

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin carboxyl-terminal hydrolase

Genbank Nucleotide ID

GL377580

Gene Name

SELMODRAFT_94540

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_94540	EFJ28006	EFJ28006

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/UCH	2.30e-75	254.8	2	319

Active Site

Position(s)	Description	Evidence
81	Nucleophile	{ECO:0000256\|PIRSR:PIRSR038120-1}
156	Proton donor	{ECO:0000256\|PIRSR:PIRSR038120-1}

Domain Profile

DUB/UCH

   S: 7    ewleLesdPglftllvedfgvkrdiqveelysLdpenlglyqepvegllllFkinekressrksqvtsndlevvdediiktiffakqvigNsCatyAllsv 107
           +w+++esdPg+ft+l+++  vk++ qveelysLd e l+l+ +pv+gl++lFk+ + ++  r          v+d+   k+iffa qvi+N+Cat+A+ls 
   Q: 2    SWCTIESDPGVFTELIQQMQVKGV-QVEELYSLDLEALSLL-RPVYGLIFLFKWRPGEKDTRP--------TVKDN---KSIFFASQVINNACATQAILSI 89
           7***********************.***************9.**************9888882........34555...557******************* PP
   S: 108  llncedklldlGttlsrlkestkaespenkalalgnqqvlecihnslariesrseperqdedneqytkeafhfvsyvningrlyeldglkpfPldlgkk.. 206
           l n  +   d+G++ls ++e+ k + pe k+l ++n+++++ +hns+ar+e++  +e++ +d+   +++++hf+sy +++g lyeldglk+ P+ lg++  
   Q: 90   LMNRVEI--DIGPELSMMREFAKDFPPELKGLTINNSEAIRTAHNSFARPEPFVPDEQKFADK---DDDVYHFISYLPVDGVLYELDGLKEGPISLGECgs 185
           ***9888..*********************************************999997775...9*******************************965 PP
   S: 207  ..keteelkdklkvvraflerikllesdeirfnllaivadrrviktlrlnvlkid.....................keLlkLlkdieseeekieaqlddek 284
              ++ e+ + ++ v+   eri+++++ eirfnl+a+ ++r+  ++++l   ++d                     +e    l +i++e+++  +++ +e+
   Q: 186  gdADSMEWLKMVQPVI--QERIEKYSKSEIRFNLMAVIKNRKDLYNQQLA--ELDrrkneisgddgmdvdsksgsgNE---ELAQIDAEIARLTEKITQED 279
           4445567777788888..************************99998884..44555899*************99853...3579**************** PP
   S: 285  ekrkkfkiddirRtenydeficifikdlaregilrklvee 324
           ek kk+k ++irR++ny  f++ f+k la++++l+ l e+
   Q: 280  EKFKKWKTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 319
           ***********************************99987 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MSWCTIESDP GVFTELIQQM QVKGVQVEEL YSLDLEALSL LRPVYGLIFL FKWRPGEKDT 60
RPTVKDNKSI FFASQVINNA CATQAILSIL MNRVEIDIGP ELSMMREFAK DFPPELKGLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTGGT GCACGATTGA ATCCGACCCA GGTGAGAATC TCTTGCTACT CAGCTGATGC 60
GATTGAGATC CTTGCCTCGC AGGCGTTTTC ACGGAGCTCA TCCAGCAAAT GCAAGTCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway

Interpro

IPR001578--Peptidase_C12_UCH
IPR017390--Ubiquitinyl_hydrolase_UCH37

Pfam

PF01088--Peptidase_C12

PRINTS

PR00707--UBCTHYDRLASE

Gene Ontology

GO:0005622--C:intracellular
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

smo:SELMODRAFT_94540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000936	Aegilops tauschii	68.71	2.00e-129	454.00
IUUC-Aml-001866	Ailuropoda melanoleuca	51.10	7.00e-91	326.00
IUUC-Apl-003306	Anas platyrhynchos	46.99	1.00e-84	305.00
IUUC-Aca-004763	Anolis carolinensis	50.78	2.00e-90	324.00
IUUC-Aly-005581	Arabidopsis lyrata	73.09	3.00e-128	450.00
IUUC-Ath-007283	Arabidopsis thaliana	72.17	6.00e-131	459.00
IUUC-Ago-007999	Ashbya gossypii	35.66	4.00e-34	137.00
IUUC-Acl-008231	Aspergillus clavatus	51.26	2.00e-60	224.00
IUUC-Afl-008557	Aspergillus flavus	41.32	7.00e-59	219.00
IUUC-Afu-008988	Aspergillus fumigatus	49.58	2.00e-60	224.00
IUUC-Ani-009420	Aspergillus nidulans	40.24	1.00e-58	219.00
IUUC-Ang-009859	Aspergillus niger	45.90	5.00e-56	210.00
IUUC-Aor-010145	Aspergillus oryzae	41.32	7.00e-59	219.00
IUUC-Ate-010347	Aspergillus terreus	47.66	2.00e-57	214.00
IUUC-Ame-010791	Astyanax mexicanus	51.08	3.00e-92	330.00
IUUC-Bta-013251	Bos taurus	51.41	2.00e-90	324.00
IUUC-Bci-013786	Botrytis cinerea	40.18	1.00e-59	222.00
IUUC-Bdi-014132	Brachypodium distachyon	71.30	2.00e-126	444.00
IUUC-Bol-015611	Brassica oleracea	72.39	6.00e-132	462.00
IUUC-Bra-017769	Brassica rapa	72.09	5.00e-131	459.00
IUUC-Cel-018604	Caenorhabditis elegans	43.65	5.00e-71	260.00
IUUC-Cja-019768	Callithrix jacchus	46.40	6.00e-85	306.00
IUUC-Cfa-020207	Canis familiaris	51.10	7.00e-91	326.00
IUUC-Cpo-021925	Cavia porcellus	48.90	2.00e-84	304.00
IUUC-Cre-022919	Chlamydomonas reinhardtii	52.00	5.00e-86	310.00
IUUC-Csa-023958	Chlorocebus sabaeus	51.41	2.00e-90	325.00
IUUC-Cho-024928	Choloepus hoffmanni	55.41	2.00e-18	85.90
IUUC-Cin-025771	Ciona intestinalis	41.77	3.00e-65	241.00
IUUC-Csv-026149	Ciona savignyi	42.51	8.00e-68	249.00
IUUC-Cgl-026424	Colletotrichum gloeosporioides	34.92	5.00e-47	180.00
IUUC-Cne-026955	Cryptococcus neoformans	34.02	2.00e-47	182.00
IUUC-Cme-027104	Cyanidioschyzon merolae	31.44	2.00e-44	172.00
IUUC-Dre-027409	Danio rerio	50.77	4.00e-91	327.00
IUUC-Dno-028921	Dasypus novemcinctus	51.10	1.00e-90	325.00
IUUC-Dor-030891	Dipodomys ordii	37.50	1.00e-37	150.00
IUUC-Dse-031170	Dothistroma septosporum	39.57	5.00e-59	220.00
IUUC-Dme-031677	Drosophila melanogaster	49.23	2.00e-84	305.00
IUUC-Ete-032646	Echinops telfairi	42.65	9.00e-40	157.00
IUUC-Eca-033776	Equus caballus	50.00	4.00e-82	296.00
IUUC-Eeu-035305	Erinaceus europaeus	43.96	2.00e-36	145.00
IUUC-Fca-035846	Felis catus	47.11	3.00e-86	311.00
IUUC-Fal-037597	Ficedula albicollis	50.33	1.00e-78	285.00
IUUC-Fso-038243	Fusarium solani	47.62	5.00e-52	197.00
IUUC-Gmo-038499	Gadus morhua	47.65	4.00e-82	296.00
IUUC-Ggr-039975	Gaeumannomyces graminis	44.13	1.00e-51	195.00
IUUC-Gga-040904	Gallus gallus	51.38	6.00e-94	336.00
IUUC-Gac-042058	Gasterosteus aculeatus	51.72	5.00e-91	327.00
IUUC-Ggo-044699	Gorilla gorilla	47.59	8.00e-79	286.00
IUUC-Hsa-046227	Homo sapiens	51.10	6.00e-91	326.00
IUUC-Hvu-047359	Hordeum vulgare	69.33	1.00e-128	451.00
IUUC-Itr-048989	Ictidomys tridecemlineatus	46.00	2.00e-84	305.00
IUUC-Lch-049829	Latimeria chalumnae	51.72	6.00e-91	326.00
IUUC-Lpe-050899	Leersia perrieri	72.10	3.00e-125	440.00
IUUC-Loc-052264	Lepisosteus oculatus	51.25	2.00e-89	321.00
IUUC-Lma-053110	Leptosphaeria maculans	50.43	1.00e-54	206.00
IUUC-Laf-053639	Loxodonta africana	51.10	7.00e-91	326.00
IUUC-Mcc-055506	Macaca mulatta	51.41	2.00e-90	325.00
IUUC-Meu-056267	Macropus eugenii	40.70	1.00e-45	177.00
IUUC-Mor-057001	Magnaporthe oryzae	47.21	5.00e-57	213.00
IUUC-Mpo-057608	Magnaporthe poae	43.24	6.00e-36	142.00
IUUC-Mtr-057731	Medicago truncatula	73.72	4.00e-135	473.00
IUUC-Mla-059016	Melampsora laricipopulina	44.12	1.00e-43	168.00
IUUC-Mga-060178	Meleagris gallopavo	50.65	9.00e-86	309.00
IUUC-Mvi-060353	Microbotryum violaceum	38.11	7.00e-53	199.00
IUUC-Mmr-060738	Microcebus murinus	50.78	1.00e-90	325.00
IUUC-Mdo-062266	Monodelphis domestica	53.59	2.00e-61	227.00
IUUC-Mmu-063619	Mus musculus	51.10	9.00e-91	325.00
IUUC-Mac-065301	Musa acuminata	74.46	3.00e-141	493.00
IUUC-Mpu-066058	Mustela putorius furo	50.78	2.00e-90	324.00
IUUC-Mlu-067292	Myotis lucifugus	50.78	2.00e-89	321.00
IUUC-Nfi-068275	Neosartorya fischeri	40.58	3.00e-62	231.00
IUUC-Ncr-068713	Neurospora crassa	39.27	1.00e-57	216.00
IUUC-Nle-069013	Nomascus leucogenys	51.41	1.00e-90	325.00
IUUC-Opr-070628	Ochotona princeps	44.06	4.00e-79	287.00
IUUC-Ont-072688	Oreochromis niloticus	50.78	2.00e-88	318.00
IUUC-Oan-073004	Ornithorhynchus anatinus	49.41	6.00e-67	246.00
IUUC-Ocu-074303	Oryctolagus cuniculus	50.78	5.00e-90	324.00
IUUC-Oba-075002	Oryza barthii	72.84	2.00e-129	454.00
IUUC-Obr-076392	Oryza brachyantha	73.67	5.00e-128	449.00
IUUC-Ogl-077271	Oryza glaberrima	72.84	2.00e-129	454.00
IUUC-Ogu-078493	Oryza glumaepatula	72.84	5.00e-130	456.00
IUUC-Oin-080084	Oryza indica	72.84	5.00e-130	456.00
IUUC-Olo-080803	Oryza longistaminata	72.53	2.00e-129	454.00
IUUC-Ome-081146	Oryza meridionalis	72.53	3.00e-129	453.00
IUUC-Oni-082146	Oryza nivara	72.84	5.00e-130	456.00
IUUC-Opu-083633	Oryza punctata	72.73	6.00e-126	442.00
IUUC-Oru-084789	Oryza rufipogon	72.84	5.00e-130	456.00
IUUC-Osa-086196	Oryza sativa	72.84	5.00e-130	456.00
IUUC-Ola-087126	Oryzias latipes	51.72	3.00e-88	317.00
IUUC-Olu-087665	Ostreococcus lucimarinus	46.18	8.00e-75	272.00
IUUC-Oga-089140	Otolemur garnettii	46.53	2.00e-85	308.00
IUUC-Oar-090296	Ovis aries	50.94	2.00e-89	321.00
IUUC-Ptr-090566	Pan troglodytes	51.10	6.00e-91	326.00
IUUC-Pan-092052	Papio anubis	51.41	2.00e-90	325.00
IUUC-Psi-093723	Pelodiscus sinensis	50.00	1.00e-82	298.00
IUUC-Pma-094568	Petromyzon marinus	40.67	1.00e-61	229.00
IUUC-Ppa-095761	Physcomitrella patens	75.14	9.00e-144	501.00
IUUC-Pfo-096210	Poecilia formosa	51.10	2.00e-89	321.00
IUUC-Pab-098463	Pongo abelii	51.41	6.00e-91	326.00
IUUC-Pop-099423	Populus trichocarpa	71.00	9.00e-133	465.00
IUUC-Pca-100108	Procavia capensis	52.24	1.00e-70	259.00
IUUC-Pva-102629	Pteropus vampyrus	53.39	5.00e-73	266.00
IUUC-Pgr-103419	Puccinia graminis	44.13	5.00e-54	203.00
IUUC-Pyt-104471	Pyrenophora triticirepentis	41.32	1.00e-60	225.00
IUUC-Rno-105579	Rattus norvegicus	45.07	2.00e-78	284.00
IUUC-Sha-106894	Sarcophilus harrisii	50.53	2.00e-78	284.00
IUUC-Sja-107732	Schizosaccharomyces japonicus	42.17	2.00e-63	234.00
IUUC-Spo-108371	Schizosaccharomyces pombe	41.82	3.00e-66	244.00
IUUC-Ssl-108467	Sclerotinia sclerotiorum	38.26	1.00e-47	182.00
IUUC-Sit-110630	Setaria italica	71.30	2.00e-130	457.00
IUUC-Sly-110972	Solanum lycopersicum	72.76	1.00e-131	461.00
IUUC-Stu-112185	Solanum tuberosum	74.62	1.00e-144	504.00
IUUC-Sar-113294	Sorex araneus	44.77	1.00e-78	285.00
IUUC-Sbi-113951	Sorghum bicolor	70.99	2.00e-129	454.00
IUUC-Ssc-115501	Sus scrofa	49.35	1.00e-83	302.00
IUUC-Tgu-117152	Taeniopygia guttata	50.00	1.00e-78	285.00
IUUC-Tru-118388	Takifugu rubripes	50.78	2.00e-90	324.00
IUUC-Tsy-119109	Tarsius syrichta	51.10	6.00e-91	326.00
IUUC-Tni-120048	Tetraodon nigroviridis	50.78	2.00e-90	325.00
IUUC-Tca-121750	Theobroma cacao	75.60	8.00e-145	505.00
IUUC-Tre-122130	Trichoderma reesei	39.48	4.00e-56	211.00
IUUC-Tae-124082	Triticum aestivum	68.29	2.00e-129	454.00
IUUC-Tur-126366	Triticum urartu	61.39	4.00e-96	344.00
IUUC-Tme-127187	Tuber melanosporum	41.14	2.00e-65	241.00
IUUC-Tbe-127619	Tupaia belangeri	44.33	5.00e-64	236.00
IUUC-Ttr-128867	Tursiops truncatus	46.22	2.00e-59	221.00
IUUC-Vda-129912	Verticillium dahliae	38.61	2.00e-55	208.00
IUUC-Vpa-130552	Vicugna pacos	52.88	1.00e-60	226.00
IUUC-Vvi-130881	Vitis vinifera	75.23	3.00e-138	483.00
IUUC-Xtr-131934	Xenopus tropicalis	50.46	2.00e-92	331.00
IUUC-Xma-133312	Xiphophorus maculatus	51.10	2.00e-89	321.00
IUUC-Yli-134487	Yarrowia lipolytica	34.31	8.00e-52	196.00
IUUC-Zma-135639	Zea mays	62.05	2.00e-117	414.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence