iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111495

Ensembl Protein ID

Solyc09g031610.2.1

UniProt Accession

K4CSL8; K4CSL8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc09g031610.2	Solyc09g031610.2.1	Solyc09g031610.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-16	60.7	148	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H+ ++tcl+f   ++++l+sG   g++ +WD
   Q: 148  HSRRITCLEFhptNNNILLSGDKKGQLGIWD 178
           999********8544**************** PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MRRRSLFPRV MIDKDTESEK SSSDEEEEDA NVVSPEEERI QKGKTPITVT LKKVCKVCKR 60
SGHEAGFRGA TYIDCPMKPC FLCKLPGHTT VTCPHRVATE YGMHPAPHKN TTNPLEFVFQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATGGGTTA AGGTTTCAAA AAAGAAGGAG AAGAGCGGGT TGTTGTTAAG TAGGTTGTGG 60
TTGTATTTGT GTATTGTGTA CCCAATTGTG TGTCGAAAGA AAATGCGTAG AAGAAGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	66.04	0.00e+00	629.00
IUUC-Aml-002203	Ailuropoda melanoleuca	28.83	1.00e-30	126.00
IUUC-Atr-002957	Amborella trichopoda	67.66	0.00e+00	696.00
IUUC-Apl-003832	Anas platyrhynchos	30.38	3.00e-36	145.00
IUUC-Aca-004358	Anolis carolinensis	31.88	8.00e-37	147.00
IUUC-Aly-006296	Arabidopsis lyrata	74.48	0.00e+00	694.00
IUUC-Ath-007115	Arabidopsis thaliana	71.96	0.00e+00	700.00
IUUC-Ame-010817	Astyanax mexicanus	30.47	3.00e-38	152.00
IUUC-Bta-012914	Bos taurus	30.49	1.00e-34	140.00
IUUC-Bdi-014261	Brachypodium distachyon	68.15	0.00e+00	658.00
IUUC-Bol-015317	Brassica oleracea	71.83	0.00e+00	694.00
IUUC-Bra-016848	Brassica rapa	72.33	0.00e+00	693.00
IUUC-Cel-018567	Caenorhabditis elegans	30.25	2.00e-08	52.40
IUUC-Cja-018967	Callithrix jacchus	29.85	1.00e-33	136.00
IUUC-Cfa-021238	Canis familiaris	28.65	1.00e-28	120.00
IUUC-Cpo-022063	Cavia porcellus	29.79	2.00e-32	132.00
IUUC-Csa-023382	Chlorocebus sabaeus	29.85	2.00e-33	135.00
IUUC-Cne-027093	Cryptococcus neoformans	26.32	2.00e-09	57.00
IUUC-Dre-028732	Danio rerio	27.54	1.00e-30	126.00
IUUC-Dor-030461	Dipodomys ordii	33.33	6.00e-26	110.00
IUUC-Ete-033038	Echinops telfairi	29.31	1.00e-31	130.00
IUUC-Eca-033772	Equus caballus	29.94	1.00e-32	133.00
IUUC-Fca-036095	Felis catus	28.53	2.00e-28	119.00
IUUC-Gmo-039683	Gadus morhua	31.48	4.00e-40	157.00
IUUC-Gga-040530	Gallus gallus	30.38	3.00e-37	148.00
IUUC-Gac-041517	Gasterosteus aculeatus	30.58	3.00e-34	138.00
IUUC-Gma-043378	Glycine max	73.91	0.00e+00	755.00
IUUC-Ggo-045364	Gorilla gorilla	30.46	1.00e-34	140.00
IUUC-Hsa-046354	Homo sapiens	30.46	1.00e-34	139.00
IUUC-Hvu-047151	Hordeum vulgare	66.67	5.00e-117	413.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	30.89	5.00e-34	137.00
IUUC-Lpe-051256	Leersia perrieri	62.32	3.00e-179	620.00
IUUC-Loc-052398	Lepisosteus oculatus	30.03	1.00e-36	147.00
IUUC-Laf-053562	Loxodonta africana	30.37	6.00e-32	130.00
IUUC-Mcc-055197	Macaca mulatta	29.50	7.00e-28	117.00
IUUC-Meu-056151	Macropus eugenii	30.60	2.00e-28	119.00
IUUC-Mtr-057940	Medicago truncatula	70.22	0.00e+00	723.00
IUUC-Mga-059923	Meleagris gallopavo	31.86	8.00e-39	154.00
IUUC-Mvi-060555	Microbotryum violaceum	22.55	3.00e-17	82.80
IUUC-Mmr-061465	Microcebus murinus	30.11	2.00e-27	115.00
IUUC-Mdo-063063	Monodelphis domestica	30.61	2.00e-36	145.00
IUUC-Mmu-064294	Mus musculus	31.08	7.00e-36	144.00
IUUC-Mac-065598	Musa acuminata	69.23	0.00e+00	684.00
IUUC-Mpu-066831	Mustela putorius furo	28.62	3.00e-28	118.00
IUUC-Mlu-067222	Myotis lucifugus	29.91	1.00e-32	133.00
IUUC-Nle-069581	Nomascus leucogenys	30.46	1.00e-34	139.00
IUUC-Opr-070644	Ochotona princeps	31.29	5.00e-34	137.00
IUUC-Ont-072605	Oreochromis niloticus	31.69	6.00e-37	147.00
IUUC-Oan-072973	Ornithorhynchus anatinus	32.46	8.00e-39	153.00
IUUC-Ocu-074615	Oryctolagus cuniculus	30.58	6.00e-34	137.00
IUUC-Oba-075283	Oryza barthii	62.47	9.00e-171	592.00
IUUC-Obr-076605	Oryza brachyantha	65.14	0.00e+00	644.00
IUUC-Ogl-077512	Oryza glaberrima	63.21	1.00e-175	608.00
IUUC-Ogu-078329	Oryza glumaepatula	62.68	6.00e-171	593.00
IUUC-Oin-079980	Oryza indica	62.68	6.00e-171	593.00
IUUC-Olo-080516	Oryza longistaminata	62.69	1.00e-167	582.00
IUUC-Ome-081415	Oryza meridionalis	63.44	9.00e-175	605.00
IUUC-Oni-082985	Oryza nivara	62.68	6.00e-171	593.00
IUUC-Opu-084159	Oryza punctata	63.62	0.00e+00	635.00
IUUC-Oru-085137	Oryza rufipogon	63.48	3.00e-177	613.00
IUUC-Osa-085614	Oryza sativa	63.48	3.00e-177	613.00
IUUC-Ola-087044	Oryzias latipes	30.43	2.00e-37	149.00
IUUC-Oga-088274	Otolemur garnettii	30.67	3.00e-33	135.00
IUUC-Oar-089826	Ovis aries	29.88	3.00e-34	138.00
IUUC-Ptr-091631	Pan troglodytes	30.46	1.00e-34	139.00
IUUC-Pan-092535	Papio anubis	29.85	3.00e-34	138.00
IUUC-Psi-093815	Pelodiscus sinensis	31.60	2.00e-34	139.00
IUUC-Pma-094474	Petromyzon marinus	29.94	7.00e-36	143.00
IUUC-Ppa-095414	Physcomitrella patens	60.00	4.00e-169	587.00
IUUC-Pfo-096559	Poecilia formosa	32.09	4.00e-38	151.00
IUUC-Pab-098528	Pongo abelii	30.46	2.00e-34	139.00
IUUC-Pop-100064	Populus trichocarpa	73.82	0.00e+00	776.00
IUUC-Pca-100803	Procavia capensis	30.03	4.00e-34	137.00
IUUC-Ppe-101966	Prunus persica	77.07	0.00e+00	780.00
IUUC-Pva-103213	Pteropus vampyrus	30.40	6.00e-34	137.00
IUUC-Rno-105087	Rattus norvegicus	30.97	1.00e-36	146.00
IUUC-Sha-107466	Sarcophilus harrisii	32.63	3.00e-39	155.00
IUUC-Smo-108958	Selaginella moellendorffii	58.86	4.00e-166	577.00
IUUC-Sit-109968	Setaria italica	67.52	5.00e-177	613.00
IUUC-Sar-113272	Sorex araneus	28.83	3.00e-29	121.00
IUUC-Sbi-114706	Sorghum bicolor	60.57	1.00e-162	565.00
IUUC-Ssc-115437	Sus scrofa	30.67	8.00e-31	127.00
IUUC-Tgu-116602	Taeniopygia guttata	30.47	3.00e-36	145.00
IUUC-Tru-118698	Takifugu rubripes	31.91	8.00e-33	133.00
IUUC-Tsy-119027	Tarsius syrichta	29.58	3.00e-27	115.00
IUUC-Tni-119787	Tetraodon nigroviridis	30.53	7.00e-38	150.00
IUUC-Tca-121447	Theobroma cacao	78.30	0.00e+00	772.00
IUUC-Tae-123253	Triticum aestivum	65.33	0.00e+00	653.00
IUUC-Tur-126724	Triticum urartu	66.36	0.00e+00	647.00
IUUC-Tbe-127680	Tupaia belangeri	26.86	1.00e-21	96.70
IUUC-Vvi-131001	Vitis vinifera	76.96	0.00e+00	765.00
IUUC-Xtr-132266	Xenopus tropicalis	33.02	7.00e-42	164.00
IUUC-Xma-133034	Xiphophorus maculatus	31.68	8.00e-36	144.00
IUUC-Yli-134341	Yarrowia lipolytica	22.61	5.00e-16	78.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence