iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114105

Ensembl Protein ID

Sb02g004670.1

UniProt Accession

C5XB42; C5XB42_SORBI

Genbank Protein ID

EER98076.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G055900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g004670	Sb02g004670.1	Sb02g004670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	8.60e-16	58.7	112	194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt......elkn..sevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
            vkvs++g+++++++dl+ + ++++L++a+ + +t      + ++   + a+ YeD+dGDl+ l++D+++d+++s      s+++l+i+k
   Q: 112  YVKVSMDGAPYLRKVDLRMYKGYRELREALDAlFTksfsaaAAEGgdHQHAIAYEDKDGDLM-LVGDVPWDMFIS------SCKKLRIMK 194
           69******************************955677777555566899************.************......********8 PP

Organism

Sorghum bicolor

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEIVDADNLS ATELRLGLPG TSSSDDWQKK PSPSVGAKRA LDDTRSEASG TSSPATAADL 60
DLDHDHDAAP PPKAQVVGWP PVRAYRKNTF QAAAAAAKKA DQQQQQQGGG LYVKVSMDGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCCTCGA CTCCATCCTC ATCTTCTACT CATCCTCATC CTCCTCTCCC TCTCGATCTC 60
AAGAGCCAGC AAGAACGCGG CATCTAGCTA CCTAGCAAGC AAGCAAGCTT TCTCTTCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sbi:SORBI_02g004670

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006269	Arabidopsis lyrata	50.48	2.00e-43	167.00
IUUC-Gma-043277	Glycine max	47.96	3.00e-45	173.00
IUUC-Mtr-058557	Medicago truncatula	47.94	6.00e-41	159.00
IUUC-Mga-059737	Meleagris gallopavo	29.79	2.10e+00	25.80
IUUC-Obr-076802	Oryza brachyantha	67.86	2.00e-46	177.00
IUUC-Pop-099628	Populus trichocarpa	50.97	3.00e-46	177.00
IUUC-Ppe-101322	Prunus persica	53.81	5.00e-48	182.00
IUUC-Sit-109772	Setaria italica	80.40	2.00e-75	275.00
IUUC-Sly-110939	Solanum lycopersicum	49.49	1.00e-43	167.00
IUUC-Stu-112670	Solanum tuberosum	47.94	5.00e-43	166.00
IUUC-Tca-121122	Theobroma cacao	50.00	1.00e-44	171.00
IUUC-Vvi-131595	Vitis vinifera	53.09	1.00e-43	168.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence