iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058575

Ensembl Protein ID

KEH42778

UniProt Accession

A0A072VMX0; A0A072VMX0_MEDTR

Genbank Protein ID

KEH42778.1

Protein Name

Auxin-induced protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g093240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g093240	KEH42778	KEH42778
MTR_1g093240	AES62057	AES62057

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.90e-16	60.4	120	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt....lt....................elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
           +vkvs++g+++++++dl  + +++dL +a+++    +t                     l+ se+ ++YeD+dGD++ l++D++++++v       s++rl
   Q: 120  FVKVSMDGAPYLRKVDLTMYKTYKDLSDALAKmfssFTtgnygaqgmidfmnesklmdLLNSSEYVPTYEDKDGDWM-LVGDVPWEMFVG------SCKRL 213
           8*******************************75543389*****************88888***************.************......***** PP
   S: 80   liqk 83
           +i+k
   Q: 214  RIMK 217
           ***8 PP

Organism

Medicago truncatula

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MATMGHGLNL KETELCLGLP GGGGGGGGGG SEVETPRASG KRGFSETVDL KLNLQTKEDL 60
NEKSASKEKT LLKDPAKPPA KAQVVGWPPV RSYRKNMMAQ KVNNTEDTEK TTSNTTAAAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACGGTTTCA TATATCTCCA CGTGTCAACA TGCAACTGGT CCCTAGCATG ATGTGAAATT 60
CGCATGCAGC CACAAACACA AAGTTTCTCA ATTAACTTAT ATTATTGAGG GGGCTATCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005852	Arabidopsis lyrata	73.21	6.00e-87	312.00
IUUC-Ath-006635	Arabidopsis thaliana	71.91	1.00e-88	318.00
IUUC-Bol-015767	Brassica oleracea	72.73	2.00e-87	314.00
IUUC-Bra-017555	Brassica rapa	73.16	7.00e-88	315.00
IUUC-Gma-043505	Glycine max	87.07	4.00e-108	383.00
IUUC-Pop-099950	Populus trichocarpa	76.09	2.00e-93	333.00
IUUC-Ppe-101719	Prunus persica	73.71	1.00e-85	308.00
IUUC-Sly-111331	Solanum lycopersicum	76.00	7.00e-83	299.00
IUUC-Stu-112437	Solanum tuberosum	73.39	9.00e-83	298.00
IUUC-Tca-121826	Theobroma cacao	81.14	1.00e-95	342.00
IUUC-Tre-122196	Trichoderma reesei	35.00	7.40e-02	32.00
IUUC-Tur-126762	Triticum urartu	51.89	1.00e-61	229.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence