iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000237

Ensembl Protein ID

EMT07414

UniProt Accession

M8BKX3; M8BKX3_AEGTA

Genbank Protein ID

EMT07414.1

Protein Name

E3 ubiquitin-protein ligase RLIM

Genbank Nucleotide ID

KD573629

Gene Name

F775_12438

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_12438	EMT07414	EMT07414

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-07	32.7	644	685

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle +   d  ++lpC H fh++C+  w       +++ +CP+C+
   Q: 644  CAVCLENPsfGDTIRTLPCFHKFHKECIDEW------LRRKKLCPVCK 685
           ******5555777******************......9*********7 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MADSVGETSV IVFLHVPDTP DRIQQSVCPV SSSAATRGVT RMAGNPSPAR RLKFKIKNIS 60
TQGQSSRGDA VSELPAPLDT DNIFKQAELA RRLSPPKLDR TTGKSVVNGN GAHSHDLDQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGGTG GTTGATATGC TGAGTGGTCA ATGCAAATTG CTGTTAAATT TGTTTAACCT 60
GATGGTCTTA TATTGTTATA TGATGACTAG CATAGAGTAT CCATCTGTTG CTTGCTTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0436--Ligase

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

ats:F775_12438

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002738	Amborella trichopoda	53.19	5.00e-28	119.00
IUUC-Aly-006291	Arabidopsis lyrata	33.69	3.00e-27	116.00
IUUC-Ath-007110	Arabidopsis thaliana	61.33	1.00e-26	114.00
IUUC-Ame-011097	Astyanax mexicanus	35.00	1.00e-13	71.20
IUUC-Bdi-014548	Brachypodium distachyon	68.59	0.00e+00	810.00
IUUC-Bol-015541	Brassica oleracea	66.67	3.00e-29	122.00
IUUC-Bra-017050	Brassica rapa	66.67	5.00e-29	122.00
IUUC-Cre-022984	Chlamydomonas reinhardtii	38.89	9.00e-17	82.40
IUUC-Cin-025124	Ciona intestinalis	50.98	2.00e-13	69.30
IUUC-Csv-026229	Ciona savignyi	52.83	1.00e-14	73.60
IUUC-Cne-027033	Cryptococcus neoformans	51.06	9.00e-11	61.20
IUUC-Dno-029105	Dasypus novemcinctus	42.50	2.00e-15	77.00
IUUC-Fca-035572	Felis catus	37.80	1.00e-15	77.40
IUUC-Gma-043843	Glycine max	63.53	1.00e-30	127.00
IUUC-Hvu-047663	Hordeum vulgare	85.57	0.00e+00	1106.00
IUUC-Lpe-051616	Leersia perrieri	52.37	6.00e-176	610.00
IUUC-Mtr-057967	Medicago truncatula	63.92	9.00e-32	131.00
IUUC-Mac-065237	Musa acuminata	43.01	7.00e-54	204.00
IUUC-Ocu-074881	Oryctolagus cuniculus	41.10	1.00e-14	73.90
IUUC-Oba-075723	Oryza barthii	58.21	0.00e+00	671.00
IUUC-Obr-076746	Oryza brachyantha	54.55	3.00e-157	548.00
IUUC-Ogl-076935	Oryza glaberrima	58.34	0.00e+00	673.00
IUUC-Ogu-077982	Oryza glumaepatula	58.07	0.00e+00	644.00
IUUC-Oin-079124	Oryza indica	56.69	4.00e-178	617.00
IUUC-Ome-081694	Oryza meridionalis	58.13	0.00e+00	679.00
IUUC-Oni-082353	Oryza nivara	58.07	0.00e+00	651.00
IUUC-Opu-083242	Oryza punctata	57.24	0.00e+00	671.00
IUUC-Oru-085078	Oryza rufipogon	58.07	0.00e+00	652.00
IUUC-Osa-086131	Oryza sativa	57.93	0.00e+00	648.00
IUUC-Oar-090427	Ovis aries	39.76	5.00e-16	79.00
IUUC-Ppa-095697	Physcomitrella patens	47.00	1.00e-25	111.00
IUUC-Pop-099565	Populus trichocarpa	61.22	6.00e-32	132.00
IUUC-Ppe-101581	Prunus persica	45.00	5.00e-36	145.00
IUUC-Smo-109212	Selaginella moellendorffii	47.57	5.00e-25	107.00
IUUC-Sit-110544	Setaria italica	51.58	1.00e-23	103.00
IUUC-Sly-110985	Solanum lycopersicum	67.39	8.00e-37	148.00
IUUC-Stu-112544	Solanum tuberosum	66.30	2.00e-36	146.00
IUUC-Tru-118302	Takifugu rubripes	38.27	1.00e-14	74.30
IUUC-Tca-121668	Theobroma cacao	28.95	9.00e-40	157.00
IUUC-Tae-124005	Triticum aestivum	94.26	0.00e+00	1225.00
IUUC-Tur-126613	Triticum urartu	96.38	0.00e+00	1171.00
IUUC-Vvi-131471	Vitis vinifera	62.37	3.00e-31	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence