iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111010

Ensembl Protein ID

Solyc10g055600.1.1

UniProt Accession

K4D1F0; K4D1F0_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g055600.1	Solyc10g055600.1.1	Solyc10g055600.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	4.40e-28	98.0	4	50

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 2    sLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           s+Ldltc+tVadmik ktpeei ktFnienDftpeEe+k+++En+WA
   Q: 4    SMLDLTCQTVADMIKEKTPEEIYKTFNIENDFTPEEEEKIKRENAWA 50
           68********************************************9 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDCSMLDLTC QTVADMIKEK TPEEIYKTFN IENDFTPEEE EKIKRENAWA G 51

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Nucleotide Sequence
(Fasta)

ATGGACTGTG TACACTCTAC CCTCCCAGAC ACCACTTTAT GGAATTTCAC TTGGTATGCT 60
GTTGTTGTTG AGAGCTTGTA GGTTAATTAT CTATTGTTAT TGTATTAAAT CATTTGCCTT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016072--Skp1_comp_dimer

Pfam

PF01466--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence