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Tag Content
iUUCD ID IUUC-Psi-093505
Ensembl Protein ID ENSPSIP00000007093.1
UniProt Accession K7FGD3; K7FGD3_PELSI
Genbank Protein ID ENSPSIP00000007093
Protein Name Presenilin
Genbank Nucleotide ID AGCU01123407
Gene Name PSEN1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPSIG00000006468.1 ENSPSIT00000007134.1 ENSPSIP00000007093.1
ENSPSIG00000006468.1 ENSPSIT00000007138.1 ENSPSIP00000007097.1
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/CUE 3.10e-06 27.2 272 306
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/CUE

   S: 2    letaleqLkeiFPnldysviqvvLeantgsleaav 36
    +eta+e+++++FP+l ys+++ +L++++ +++a+
   Q: 272 VETAQERNETLFPALVYSSTMIWLVNMAEEDPEAQ 306
    89*************************98888776 PP
   

Organism Pelodiscus sinensis
Functional Description
(View)

Functional Description



     Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Protein Sequence
(Fasta)
MTELSAHLPQ FQHGQLTENF PDNHLSNTND NSERRRHDNC ERRRNDNPES ETNGQPQNST 60
QQVVEQEEED EELTLKYGAK HVIMLFVPVT LCMVVVVATI KSVSFYTRKD GQLIYTPFTE 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Psi-093505|UBD,CUE|Pelodiscus sinensis
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGCGGGGCTT GGGCCGGAAG TAATTGGGAC CGGACACGCT CGGGGAACCA AGTAGCTAGC 60
GGCGGTGAGT GGCGGGCGGA GGGGACCGTG CTCTGGGGGG CACCCATAGT CTCGGGTGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Psi-093505|UBD,CUE|Pelodiscus sinensis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002031--Pept_A22A_PS1
IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN
PR01073--PRESENILIN1

SMART

SM00730--PSN

Gene Ontology

GO:0016235--C:aggresome
GO:0030424--C:axon
GO:0005938--C:cell cortex
GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0035253--C:ciliary rootlet
GO:0031410--C:cytoplasmic vesicle
GO:0043198--C:dendritic shaft
GO:0005789--C:endoplasmic reticulum membrane
GO:0070765--C:gamma-secretase complex
GO:0000139--C:Golgi membrane
GO:0030426--C:growth cone
GO:0005887--C:integral component of plasma membrane
GO:0000776--C:kinetochore
GO:0045121--C:membrane raft
GO:0005739--C:mitochondrion
GO:0043025--C:neuronal cell body
GO:0005640--C:nuclear outer membrane
GO:0098793--C:presynapse
GO:0005791--C:rough endoplasmic reticulum
GO:0005790--C:smooth endoplasmic reticulum
GO:0042500--F:aspartic endopeptidase activity, intramembrane cleaving
GO:0005262--F:calcium channel activity
GO:0000186--P:activation of MAPKK activity
GO:0000045--P:autophagosome assembly
GO:0034205--P:beta-amyloid formation
GO:0001568--P:blood vessel development
GO:0048854--P:brain morphogenesis
GO:0021870--P:Cajal-Retzius cell differentiation
GO:0001708--P:cell fate specification
GO:0006974--P:cellular response to DNA damage stimulus
GO:0021795--P:cerebral cortex cell migration
GO:0015871--P:choline transport
GO:0021904--P:dorsal/ventral neural tube patterning
GO:0030326--P:embryonic limb morphogenesis
GO:0050673--P:epithelial cell proliferation
GO:0001947--P:heart looping
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0035556--P:intracellular signal transduction
GO:0015813--P:L-glutamate transport
GO:0006509--P:membrane protein ectodomain proteolysis
GO:0007613--P:memory
GO:0006839--P:mitochondrial transport
GO:0043011--P:myeloid dendritic cell differentiation
GO:2001234--P:negative regulation of apoptotic signaling pathway
GO:0050771--P:negative regulation of axonogenesis
GO:0007175--P:negative regulation of epidermal growth factor-activated receptor activity
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0051444--P:negative regulation of ubiquitin-protein transferase activity
GO:0051402--P:neuron apoptotic process
GO:0048666--P:neuron development
GO:0001764--P:neuron migration
GO:0007220--P:Notch receptor processing
GO:0007219--P:Notch signaling pathway
GO:0043065--P:positive regulation of apoptotic process
GO:0050820--P:positive regulation of coagulation
GO:0060999--P:positive regulation of dendritic spine development
GO:0043406--P:positive regulation of MAP kinase activity
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0001921--P:positive regulation of receptor recycling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0009791--P:post-embryonic development
GO:0006486--P:protein glycosylation
GO:0016485--P:protein processing
GO:0015031--P:protein transport
GO:0060828--P:regulation of canonical Wnt signaling pathway
GO:0043393--P:regulation of protein binding
GO:0060075--P:regulation of resting membrane potential
GO:0048167--P:regulation of synaptic plasticity
GO:0051966--P:regulation of synaptic transmission, glutamatergic
GO:0006979--P:response to oxidative stress
GO:0016337--P:single organismal cell-cell adhesion
GO:0048705--P:skeletal system morphogenesis
GO:0043589--P:skin morphogenesis
GO:0051563--P:smooth endoplasmic reticulum calcium ion homeostasis
GO:0001756--P:somitogenesis
GO:0016080--P:synaptic vesicle targeting
GO:0002286--P:T cell activation involved in immune response
GO:0050852--P:T cell receptor signaling pathway
GO:0048538--P:thymus development

KEGG pss:102445249
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000686 Aegilops tauschii 33.99 5.00e-25 109.00
IUUC-Aml-001648 Ailuropoda melanoleuca 85.21 4.00e-149 520.00
IUUC-Atr-003039 Amborella trichopoda 32.21 3.00e-39 155.00
IUUC-Apl-003727 Anas platyrhynchos 93.80 0.00e+00 724.00
IUUC-Aca-004582 Anolis carolinensis 88.03 0.00e+00 713.00
IUUC-Aly-005455 Arabidopsis lyrata 42.86 3.00e-18 85.90
IUUC-Ath-006730 Arabidopsis thaliana 45.38 2.00e-18 86.70
IUUC-Ame-011500 Astyanax mexicanus 74.89 5.00e-152 530.00
IUUC-Bta-013026 Bos taurus 79.42 1.00e-177 615.00
IUUC-Bdi-014196 Brachypodium distachyon 33.06 3.00e-28 119.00
IUUC-Bol-015841 Brassica oleracea 36.81 3.00e-31 129.00
IUUC-Bra-017580 Brassica rapa 34.17 1.00e-29 123.00
IUUC-Cel-018553 Caenorhabditis elegans 53.23 3.00e-94 338.00
IUUC-Cja-019994 Callithrix jacchus 86.26 2.00e-175 607.00
IUUC-Cfa-020074 Canis familiaris 82.94 0.00e+00 638.00
IUUC-Cpo-022237 Cavia porcellus 84.70 0.00e+00 630.00
IUUC-Cre-022747 Chlamydomonas reinhardtii 33.79 2.00e-28 120.00
IUUC-Csa-023537 Chlorocebus sabaeus 82.42 0.00e+00 647.00
IUUC-Cho-024735 Choloepus hoffmanni 73.73 1.00e-168 585.00
IUUC-Cin-025780 Ciona intestinalis 61.40 3.00e-124 438.00
IUUC-Csv-025967 Ciona savignyi 61.63 2.00e-120 425.00
IUUC-Dre-028689 Danio rerio 72.67 2.00e-146 511.00
IUUC-Dno-029758 Dasypus novemcinctus 83.05 0.00e+00 635.00
IUUC-Dor-030609 Dipodomys ordii 62.77 1.00e-142 499.00
IUUC-Dme-031929 Drosophila melanogaster 55.37 2.00e-111 395.00
IUUC-Ete-032487 Echinops telfairi 74.29 1.00e-72 266.00
IUUC-Eca-034387 Equus caballus 72.91 5.00e-129 454.00
IUUC-Eeu-035134 Erinaceus europaeus 84.69 1.00e-131 462.00
IUUC-Fca-036243 Felis catus 83.01 0.00e+00 630.00
IUUC-Fal-036600 Ficedula albicollis 93.16 0.00e+00 719.00
IUUC-Gmo-038550 Gadus morhua 65.66 3.00e-114 404.00
IUUC-Gga-040993 Gallus gallus 92.95 0.00e+00 727.00
IUUC-Gac-042342 Gasterosteus aculeatus 68.56 4.00e-134 471.00
IUUC-Gma-043822 Glycine max 38.83 6.00e-23 101.00
IUUC-Ggo-044859 Gorilla gorilla 81.09 2.00e-141 494.00
IUUC-Hsa-046822 Homo sapiens 82.42 0.00e+00 647.00
IUUC-Hvu-047141 Hordeum vulgare 35.20 1.00e-26 114.00
IUUC-Itr-048420 Ictidomys tridecemlineatus 87.27 1.00e-143 501.00
IUUC-Lch-049946 Latimeria chalumnae 72.71 2.00e-155 541.00
IUUC-Lpe-051132 Leersia perrieri 32.43 6.00e-31 128.00
IUUC-Loc-052469 Lepisosteus oculatus 66.10 2.00e-150 525.00
IUUC-Laf-053979 Loxodonta africana 84.63 1.00e-165 575.00
IUUC-Mcc-055682 Macaca mulatta 82.42 0.00e+00 647.00
IUUC-Meu-056004 Macropus eugenii 72.51 8.00e-146 509.00
IUUC-Mtr-058392 Medicago truncatula 32.60 1.00e-28 120.00
IUUC-Mga-059466 Meleagris gallopavo 92.52 0.00e+00 723.00
IUUC-Mdo-062122 Monodelphis domestica 82.07 0.00e+00 639.00
IUUC-Mmu-063176 Mus musculus 81.61 2.00e-180 625.00
IUUC-Mac-064858 Musa acuminata 37.44 3.00e-20 92.00
IUUC-Mpu-065927 Mustela putorius furo 83.33 0.00e+00 635.00
IUUC-Mlu-067079 Myotis lucifugus 81.53 0.00e+00 654.00
IUUC-Nle-070180 Nomascus leucogenys 82.42 0.00e+00 647.00
IUUC-Opr-070847 Ochotona princeps 77.59 7.00e-168 583.00
IUUC-Ont-071846 Oreochromis niloticus 79.20 2.00e-150 525.00
IUUC-Oan-072783 Ornithorhynchus anatinus 85.28 2.00e-138 484.00
IUUC-Ocu-074527 Oryctolagus cuniculus 82.52 0.00e+00 650.00
IUUC-Oba-075256 Oryza barthii 34.25 8.00e-29 120.00
IUUC-Obr-076302 Oryza brachyantha 43.45 3.00e-17 82.80
IUUC-Ogl-077097 Oryza glaberrima 33.24 8.00e-30 124.00
IUUC-Ogu-078570 Oryza glumaepatula 33.24 9.00e-30 124.00
IUUC-Oin-079244 Oryza indica 33.24 7.00e-30 124.00
IUUC-Olo-080484 Oryza longistaminata 36.43 7.00e-25 107.00
IUUC-Ome-081814 Oryza meridionalis 32.68 5.00e-30 125.00
IUUC-Oni-082057 Oryza nivara 33.24 8.00e-30 124.00
IUUC-Opu-084176 Oryza punctata 33.05 2.00e-29 122.00
IUUC-Oru-084618 Oryza rufipogon 33.24 1.00e-29 123.00
IUUC-Osa-085602 Oryza sativa 32.96 3.00e-29 122.00
IUUC-Olu-087811 Ostreococcus lucimarinus 34.43 7.00e-44 170.00
IUUC-Oar-090348 Ovis aries 81.32 0.00e+00 654.00
IUUC-Ptr-091060 Pan troglodytes 82.42 0.00e+00 647.00
IUUC-Pan-091855 Papio anubis 76.48 3.00e-164 571.00
IUUC-Pma-094612 Petromyzon marinus 70.63 4.00e-124 437.00
IUUC-Pfo-097396 Poecilia formosa 75.52 3.00e-156 544.00
IUUC-Pab-098591 Pongo abelii 82.91 0.00e+00 652.00
IUUC-Pop-099661 Populus trichocarpa 31.85 1.00e-31 130.00
IUUC-Pca-101029 Procavia capensis 80.72 2.00e-172 597.00
IUUC-Ppe-101495 Prunus persica 31.17 5.00e-38 151.00
IUUC-Pva-102244 Pteropus vampyrus 77.71 9.00e-172 595.00
IUUC-Rno-105861 Rattus norvegicus 80.85 5.00e-178 617.00
IUUC-Sha-107045 Sarcophilus harrisii 83.93 0.00e+00 643.00
IUUC-Smo-109325 Selaginella moellendorffii 34.53 4.00e-37 148.00
IUUC-Sit-110624 Setaria italica 33.64 9.00e-26 111.00
IUUC-Sly-110865 Solanum lycopersicum 54.55 5.00e-07 45.40
IUUC-Stu-112433 Solanum tuberosum 35.08 4.00e-32 132.00
IUUC-Sar-113169 Sorex araneus 81.36 4.00e-131 461.00
IUUC-Sbi-114305 Sorghum bicolor 33.44 1.00e-25 110.00
IUUC-Ssc-115766 Sus scrofa 81.53 1.00e-178 619.00
IUUC-Tgu-116469 Taeniopygia guttata 93.81 9.00e-155 538.00
IUUC-Tru-117732 Takifugu rubripes 77.56 3.00e-148 518.00
IUUC-Tsy-119624 Tarsius syrichta 74.04 2.00e-166 578.00
IUUC-Tni-119852 Tetraodon nigroviridis 70.56 5.00e-139 487.00
IUUC-Tca-121865 Theobroma cacao 32.24 4.00e-36 145.00
IUUC-Tae-123984 Triticum aestivum 35.31 1.00e-26 113.00
IUUC-Tur-126237 Triticum urartu 35.31 2.00e-26 113.00
IUUC-Tbe-128148 Tupaia belangeri 72.03 3.00e-139 487.00
IUUC-Ttr-128793 Tursiops truncatus 81.10 6.00e-176 610.00
IUUC-Vpa-130625 Vicugna pacos 66.81 6.00e-138 483.00
IUUC-Vvi-131312 Vitis vinifera 37.22 7.00e-19 88.20
IUUC-Xtr-131790 Xenopus tropicalis 81.28 1.00e-166 578.00
IUUC-Xma-133377 Xiphophorus maculatus 77.20 7.00e-154 536.00
Created Date 25-Jun-2017

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