iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014146

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000884

Gene Name

LOC100833037; BRADI_5g09830

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G09830	BRADI5G09830.1	BRADI5G09830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.40e-09	36.6	115	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+df   ++++vlp C+H fh  C+ +w         + +CP+Cr
   Q: 115  CAICLSDFepGEHVRVLPkCNHGFHVRCIDRW------LLARSSCPTCR 157
           ********77444*******************......999999****8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MYARRTLLHA FSGQPSGPSQ PVAATSATDD GAPGSNFDAN VVMILAVLLC ALICVLGLNS 60
IVRCALRCSS RVVVDSEPNL VARLAKGGLR RKALRAMPIL VYSARLRLST ASPLCAICLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCTACCTG AGGCAAATCA AATCACGTAG CAACACACTT ACTAAACCAG ATTGATCCAC 60
ATATTTGCAG TTGCAGGATT CTGAAGAAAG ATCCAGCCAG GCAGGGAGGG TAAACATGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100833037

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002440	Amborella trichopoda	50.96	6.00e-28	116.00
IUUC-Aly-006297	Arabidopsis lyrata	47.74	8.00e-39	152.00
IUUC-Ath-006920	Arabidopsis thaliana	44.55	4.00e-34	137.00
IUUC-Bol-015875	Brassica oleracea	47.03	2.00e-43	167.00
IUUC-Bra-017456	Brassica rapa	45.54	7.00e-44	169.00
IUUC-Gma-043693	Glycine max	46.30	3.00e-48	183.00
IUUC-Hvu-047571	Hordeum vulgare	75.98	3.00e-72	263.00
IUUC-Lpe-051348	Leersia perrieri	75.38	4.00e-72	263.00
IUUC-Mtr-058186	Medicago truncatula	48.21	6.00e-43	166.00
IUUC-Mac-065335	Musa acuminata	54.46	2.00e-47	181.00
IUUC-Oba-075992	Oryza barthii	72.25	9.00e-59	219.00
IUUC-Obr-076307	Oryza brachyantha	70.79	6.00e-62	229.00
IUUC-Ogl-077735	Oryza glaberrima	69.80	2.00e-59	220.00
IUUC-Ogu-078127	Oryza glumaepatula	71.68	2.00e-58	218.00
IUUC-Olo-080939	Oryza longistaminata	69.31	1.00e-59	221.00
IUUC-Ome-081946	Oryza meridionalis	72.25	7.00e-58	216.00
IUUC-Oni-083084	Oryza nivara	72.25	7.00e-59	219.00
IUUC-Opu-084141	Oryza punctata	71.86	9.00e-56	209.00
IUUC-Oru-084596	Oryza rufipogon	72.25	4.00e-59	220.00
IUUC-Osa-085865	Oryza sativa	70.30	1.00e-59	221.00
IUUC-Pop-099910	Populus trichocarpa	51.22	8.00e-55	205.00
IUUC-Ppe-101930	Prunus persica	54.19	7.00e-50	189.00
IUUC-Sit-110398	Setaria italica	79.40	3.00e-72	263.00
IUUC-Sly-111559	Solanum lycopersicum	40.20	2.00e-39	154.00
IUUC-Stu-112198	Solanum tuberosum	45.07	1.00e-41	161.00
IUUC-Sbi-114701	Sorghum bicolor	69.07	8.00e-58	216.00
IUUC-Tca-120946	Theobroma cacao	49.75	5.00e-52	196.00
IUUC-Tae-123289	Triticum aestivum	76.38	3.00e-68	250.00
IUUC-Tur-126213	Triticum urartu	73.79	3.00e-44	168.00
IUUC-Vvi-130883	Vitis vinifera	48.39	4.00e-37	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence